Rhodoferax sp. BAB1: HTY51_07105
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Entry
HTY51_07105 CDS
T08955
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HTY51_07105 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhob03400
]
HTY51_07105 (nth)
Enzymes [BR:
rhob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HTY51_07105 (nth)
DNA repair and recombination proteins [BR:
rhob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HTY51_07105 (nth)
Prokaryotic type
HTY51_07105 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QKO21672
UniProt:
A0A6N0BT19
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All DBs
Position
complement(1469926..1470564)
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AA seq
212 aa
AA seq
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MTPAAIRSFFATLQAANPQPVTELEYTSVFELLTAVLLSAQATDVGVNKATRKLFPVANT
PQQILDLGLEGLEGYIKTIGLYRSKAKHLMETCRMLVERHGGQVPRTREALEALPGVGRK
TANVVLNSAFGEPTMAVDTHIFRVGNRTGLAPGRNPYEVEMQLLKRVPPEFLVDAHHWLI
LHGRYVCQARKPQCWVCSVSAYCDFKDKTPAP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgccgccatccgctccttcttcgccacgctccaggcggccaacccgcaaccc
gtcaccgaactcgaatacacctcggtttttgagctgctgaccgcggtgctgctctcggcc
caggccaccgacgtgggcgtgaacaaggccacgcgcaagctcttcccggtggcgaacacg
ccgcagcagatcctggacctgggactcgaagggctggagggctacatcaagaccatcggc
ctgtaccgcagcaaggcgaaacacctgatggaaacctgccgcatgctggtggaacgccac
ggcggccaggtgccgcgcacgcgcgaggcgctcgaagccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacagtgccttcggcgagccgaccatggcggtcgacacgcac
atcttccgcgtcggcaaccgcaccggcctggcgccgggcaggaacccgtacgaggtggag
atgcagctcctgaagcgcgtgccgcccgagttcctggtggacgcgcaccactggctgatc
ctgcacgggcgttatgtgtgccaggcccgcaagccgcagtgctgggtgtgcagcgtgtcg
gcgtattgcgacttcaaggacaagacgcctgcgccctga
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