Rhodococcus sp. 008: AOT96_22630 Help Entry AOT96_22630       CDS       T05462                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rhod  Rhodococcus sp. 008 Pathway rhod03030   DNA replication rhod03410   Base excision repair rhod03420   Nucleotide excision repair rhod03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rhod00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AOT96_22630    03410 Base excision repair     AOT96_22630    03420 Nucleotide excision repair     AOT96_22630    03430 Mismatch repair     AOT96_22630  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rhod03032]     AOT96_22630    03400 DNA repair and recombination proteins [BR:rhod03400]     AOT96_22630 Enzymes [BR:rhod01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AOT96_22630 DNA replication proteins [BR:rhod03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AOT96_22630 DNA repair and recombination proteins [BR:rhod03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AOT96_22630    NER (nucleotide excision repair)     GGR (global genome repair) factors      AOT96_22630    MMR (mismatch excision repair)     DNA ligase      AOT96_22630   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AOT96_22630 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH Nlig-Ia HHH_3 UPF0758_N Motif Other DBs NCBI-ProteinID:  ANQ75171 LinkDB All DBs Position 4856728..4858827 Genome browser AA seq 699 aa AA seqDB search MSHAQAAPASSMSAKERWKELAEIVRKHQDFYHSMGNSIISDQQYDTLFAELKALEDDYR ELRRSDSPTQRVGGKLSTDFAPVDHLERMLSLDNVFNEEELRIWISRVEHEVGSNLHYLC EVKIDGVALNIVYEKGRLVRAATRGDGRTGEDVTLNALAIQDVPRWLTGSTRFPVPRLLE VRGEVFFRIEDFLNLNASLLEKGKPPFANPRNSAAGSLRQKNPHITAERRLGMTCHGFGR IEGFEPMSQYDAYSALREWGLPVSSYTSRVVGADAVVEAVQYWGRHRADVDHEIDGLVIK VDEMALQRRLGTTSRAPRWAIAYKYPPEEVTTKLLDIRVSVGRTGRVTPFAYMEPVTVAG STVSLATLHNGSEVKRKGVLIGDTVVLRKAGDVIPEVLGPVADVRDGTEREFVMPTHCPE CGTLLAPAKEGDVDVRCPNQQYCPAQLRERVFHVSGRGAFDIEVLGYEAATGLLEAKVIG DEGDLFSLDAEKLIEVPIFRTNAGSLSANGKRLLANLDSAKDKPLWRVLVALSIRHVGPT AARALAGEFGSLQRIREASVDELAAVDGVGSTIAAAVVEWFSVDWHQQIVDKWASAGVRM EDERDDSIPRNLEGLSIVVTGSLETYSRDQAKEAILVRGGKAAGSVSKKTAFVVVGEAPG SKHDKAVELGVPVLDEDGFRRLLEDGPDAVAPTNLDEPE NT seq 2100 nt NT seq  +upstreamnt  +downstreamnt ctgtcgcacgcgcaggctgcgccagcttcgtccatgtcagcgaaagagcgctggaaagag ttggcagagatcgttcgaaagcatcaggatttttaccattctatggggaattcaataatt tcggaccagcaatacgacacactgttcgcagagttgaaggcattagaggatgattatcgg gaattgcgacgatcagattctcctactcagcgagtcgggggcaagctttcgacggacttc gctccggtggatcacctagagcgaatgttaagtctagataacgtattcaacgaagaagaa ttgcgaatctggatctctcgcgtcgaacatgaagttggctctaatttgcactatttgtgc gaagtcaagatcgacggcgttgcactcaatattgtttatgaaaaaggtagactggttcgc gcggcgacgcgaggtgatggacgaacgggagaagacgttaccctcaacgcgctcgcgatt caggacgttcccagatggctaactggtagcaccagatttcctgtgccgcggcttctagaa gtgcgtggtgaagtcttctttcgaatagaggatttcctgaatctgaatgcatccctgttg gaaaaaggaaagcctcctttcgcaaatccgcgtaactctgctgcaggctcgcttagacag aagaatccgcacattacagccgaacgacgtttgggaatgacatgccacggattcggtcgc attgaaggtttcgagccgatgtcgcaatatgacgcttacagcgcgctccgcgagtgggga ctccccgtatcaagctatacatcccgagtcgttggtgctgacgcagttgtcgaggcggtt cagtattggggtcgtcaccgtgccgacgttgatcatgagattgatggtctagtcatcaaa gtcgatgagatggcattacaaaggcgtctggggaccacgtcacgcgcaccacggtgggcg atcgcgtacaagtacccgccggaagaggtcacgaccaagctcctcgacatccgggtcagt gtcggacgtacgggtcgtgtgacgccgttcgcgtacatggaacccgtcacggtggcgggt tccactgtgtccttggccacgctgcacaacggctcggaggtcaagcgcaagggtgtgctg atcggcgacaccgtggtgttgcgcaaggccggagacgtcatccccgaggttctcggtccc gtggcagacgttcgtgacggtaccgagcgcgagttcgtcatgccgacacattgtcccgag tgcggcacgttgttggcacccgcgaaagagggcgacgtcgacgtgcgatgccccaatcag cagtactgcccggcgcagttgcgcgagcgcgtgttccacgtctcggggcgcggtgcattc gacatcgaggtgctcggttacgaggccgcgaccgggctgttggaggcgaaggtcatcggc gacgagggcgatctcttctcactcgacgccgagaaactgatcgaagttccgatcttccgc accaatgcgggatccctgtccgccaacggaaaacgcttgctggccaacctggattcggcc aaggacaagccgctgtggagagtgcttgtggcactgtcgattcggcacgtcggccccact gccgcgagggcgttggccggcgaattcggctcgctgcaacgcattcgggaagcctcggtc gacgagttggctgcagtggacggcgtcggatcgactatcgccgccgccgtcgtggagtgg ttctccgtcgactggcatcagcagatcgtcgacaagtgggcgtcggccggagtacgcatg gaggacgaacgcgacgattcgattccgcgcaatctcgagggcctctcgatcgtcgtcacc ggttcgctcgagacctactcgcgtgatcaggcgaaggaagcgattctggtgcgcggcggc aaggcggcagggtcggtctcgaagaagactgcgtttgtcgtcgtcggtgaagcgcccggt tccaagcacgacaaggcggtcgaattgggtgtgccggtgctcgacgaagacggcttccgg cggttgctcgaagatggcccggatgcggtcgctcccaccaatttggacgaaccagagtga

DBGET integrated database retrieval system