Rhodopseudomonas sp. P1: LRC39_00940
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Entry
LRC39_00940 CDS
T11217
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00020
Citrate cycle (TCA cycle)
rhoe00785
Lipoic acid metabolism
rhoe01100
Metabolic pathways
rhoe01110
Biosynthesis of secondary metabolites
rhoe01120
Microbial metabolism in diverse environments
rhoe01200
Carbon metabolism
rhoe01210
2-Oxocarboxylic acid metabolism
Module
rhoe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhoe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRC39_00940
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LRC39_00940
Enzymes [BR:
rhoe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LRC39_00940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
XAT73563
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All DBs
Position
complement(199167..202124)
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AA seq
985 aa
AA seq
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MSRQDANAAFALSSFLQGANATYIDDLYSRYESDPSSVDADWQAFFQSLKDAPGDIQKNA
EGPSWEQANWPLTPRDELTSALDGNWNQVEKAVGQKIQAKAQSRGVELSSADVLQATRDS
VRALMLIRAYRMRGHFHAKLDPLGLSPAKDHEELDIRSYGFTEADLDRKIFLDHVLGLEY
GSLREIVAICERTYCQTMGIEFLHISNGAQKAWIQERIEGPDKEISFTREGRRAILMKLI
EAEGFEKFCDLKFTGTKRFGLDGGEALIPALEQIIKRGGNLGVREIVLGMPHRGRLNVLT
QVMAKAHRALFHEFKGGSANPDEVEGSGDVKYHLGASSDREFDHNKVHLSLTANPSHLEI
VDPVVLGKVRAKQDQHGDLPEERISVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGS
IHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKIAVEYRQKF
HKPVVIDMFCYRRHGHNEGDEPSFTQPLMYRKIAGHPTTLEIYSKRLIADGVITEGEVEK
ARADWRARLDAEFEAASSYRPNKADWLDGKWAGFKSADQDEEPRRGITGVDLPTLKEIGR
RITKVPEGFRLHRTVQRFLENRARAIDSGNGLDWATGEALAFCTMLLEGHRIRLSGQDSE
RGTFSQRHSVLIDQEDETRYTPFNHLSPDQGHYEVINSLLSEEAVLGFEYGYSLAEPNAL
TLWEAQFGDFANGAQVLFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLERYLQ
MCAEDNMQVVYPTTPANYFHALRRQLKREIRKPLILMTPKSLLRHKRAVSRLEELGPDTS
FHRVLLDDAQTQSDDKTKLVADAKIRRVVVCSGKVYYDLYDEREKRGIDDVYLLRVEQLY
PVPVKTLVHELSRFKDAELVWCQEEPRNMGGWHFIEPYLEWVQNQIEAKHRRPRYVGRPA
SAATATGLMSKHLAQLKAFLDEALR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaggacgcgaatgccgctttcgccctatcttcgtttctgcagggcgccaac
gccacctacatcgacgacctttactcccggtatgaaagcgatccgtcctcggtcgatgcc
gactggcaggcattcttccagagcctcaaagacgcccccggcgacatccagaagaacgcc
gagggcccgtcctgggagcaggcgaactggccgctgaccccgcgggacgaactaacctct
gcgctcgacggtaactggaatcaggtcgaaaaggccgttggccagaagatccaggccaag
gcccagagccgcggcgtcgagctgtcctccgccgacgtgctgcaggccacccgggactcg
gtccgggccctgatgctgatccgcgcctaccggatgcgcggccatttccacgccaagctc
gatccgctcggcctgtcgccggcgaaggatcacgaggagctcgacatccgctcctacggc
ttcaccgaggccgatctcgaccgcaagatcttcctcgatcacgttcttggcctcgaatac
ggctcgctccgcgagatcgtcgcgatctgcgagcgcacctactgccagaccatgggcatc
gagtttctgcacatctccaatggtgcgcagaaggcctggatccaggagcggatcgaaggt
ccggataaggaaatcagcttcacccgcgagggccggcgcgcgatcctgatgaagctgatc
gaggccgaaggcttcgagaagttctgcgatctgaagttcaccggcaccaagcggttcggt
ctcgacggcggcgaagcgctgatcccggcgctggagcagatcatcaagcgcggcggcaat
ctcggcgtccgcgaaatcgtgctcggcatgccgcatcgcggccgtctcaacgtcctgacc
caggtgatggccaaggcccatcgggcgctgttccacgagttcaagggcggctccgccaac
ccggacgaggtcgaaggctcgggcgacgtcaaatatcacctcggcgcgtcgtcggaccgt
gagttcgaccacaacaaggtccacctgtcgctgaccgccaacccgtcgcacctcgagatc
gtcgaccctgtggtgctcggcaaggtgcgcgccaagcaggaccagcacggcgatctgccc
gaggagcgcatctcggtgctgccgctgttgatgcacggcgacgctgcgttcgccggccag
ggcgtggttgccgagtgcttcgcgctgtccgacctgaagggctatcgcaccggcggttcg
atccacttcatcgtcaacaaccagatcggcttcaccacctatccgcgctattcgcgctcc
tcgccgtatccgtcggatgtggcgaagatgatcgacgcgccgatcttccacgtcaacggc
gacgatccggaagcggtggtgttcgccgccaagatcgcggtcgagtaccggcagaagttc
cacaagccggtcgtcatcgacatgttctgctaccggcggcacggccacaacgaaggcgat
gagccgtcgttcacccagccgctgatgtatcgcaagatcgccggtcacccgacgacgctg
gagatttactccaagcgcctgatcgccgatggcgtcatcaccgagggcgaggtcgagaag
gcgcgggccgattggcgtgcccggctcgacgccgagttcgaggccgcgtccagctatcgc
ccgaataaggccgactggctcgacggcaagtgggccggcttcaagtcggccgaccaggac
gaagaaccgcgccgcggcatcaccggcgttgatcttccgaccctgaaggagatcggccgc
aggatcaccaaggtgccggagggcttccgcctgcaccgcaccgtgcagcgcttcctcgaa
aaccgcgctcgcgcgattgactctggcaatggactcgactgggcgaccggcgaagcgctg
gcgttctgcaccatgctgctggaaggccatcgcatccgcctctctggtcaggactccgag
cgcggtacgttctcgcagcgccattcggtgctgatcgatcaggaagacgagacccgctac
accccgttcaatcacctctcgcccgaccaggggcactatgaggtgatcaactcgctgctg
tcagaagaagcggtgctcggcttcgaatacggctactcgctggccgagccgaacgcgctg
acgctgtgggaagcccagttcggcgacttcgccaacggcgctcaggtgttgttcgaccag
ttcatctcgtcgggcgagcgcaagtggctgcggatgtcgggcctggtctgcctgctgccc
catggctacgagggtcagggccccgagcattcgtcggcccgtctggagcgctatctgcag
atgtgcgccgaagacaacatgcaggtggtgtatccgaccacgccggcgaactacttccat
gcgctccgtcgtcagctcaagcgcgagatccgcaagccgttgatcctgatgacgccgaag
tcgctgcttcgccacaagcgggcggtctcgcggctcgaagagctcggccccgataccagc
ttccaccgcgtgctgcttgacgacgcgcagacgcagtcggacgacaagaccaagctggtg
gcggacgccaagatccgccgcgtcgtggtgtgctccggcaaggtctattacgacctctac
gacgagcgcgaaaagcgcggcatcgacgacgtctatctgctgcgcgtcgagcagctctat
ccggtgccggtcaagacgctggtgcacgagctgtcgcgcttcaaggatgcggagctggtg
tggtgtcaggaagagccgcgcaacatgggcggctggcacttcatcgagccgtatctggag
tgggtgcagaaccagatcgaagccaagcatcgtcggccgcgttacgtcggccgccccgct
tctgcggcgactgcgaccggcttgatgtcgaagcacctggcgcagctcaaggcgttcctc
gacgaagcgttgcgttga
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