Rhodopseudomonas sp. P1: LRC39_19970
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Entry
LRC39_19970 CDS
T11217
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe01501
beta-Lactam resistance
rhoe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRC39_19970
01503 Cationic antimicrobial peptide (CAMP) resistance
LRC39_19970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhoe03036
]
LRC39_19970
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoe02000
]
LRC39_19970
01504 Antimicrobial resistance genes [BR:
rhoe01504
]
LRC39_19970
Chromosome and associated proteins [BR:
rhoe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LRC39_19970
Transporters [BR:
rhoe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LRC39_19970
Antimicrobial resistance genes [BR:
rhoe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LRC39_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CzcB
YknX_C
BSH_CusB
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
XAT72519
LinkDB
All DBs
Position
complement(4320040..4321227)
Genome browser
AA seq
395 aa
AA seq
DB search
MTTKTKAALRAACAFGVVVSLAGCGDGKQAGADKQAPPVVVSVVTVAPETLRIVSDLPGR
IAPTRIAEVRPRVSGIIIERVFQQGTIVKQGDVLYRLDPAPFQVRVASAKATLQRAVATR
TLAAQQAERQTRLKDRDVTTVQLYDKAVAELAQAEADEASARAGLQAAELDLQYTEVRAP
ITGRIGRALITEGALFTVGGSESLATIQQLDPVYADFTQSANELLALKRAAQQSAKAGDA
IEAEVRLRFDDGASYAHRGRLLFSEASVDATTGQVTLRGEFPNPDGDLLPGMYVRVQLVQ
GEQPNALAVPERALRRDPGGQAQLYVVSADRKAELRPVTPSRLVDGRWIIASGLHPGDAV
VVQGFQALSPGAAVDPKPWPNAAAAGTTSAASQAK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgaagacaaaggccgccctccgggccgcttgcgcgtttggcgtggtggtgagt
ctggccggctgcggtgacggcaaacaagcaggagccgacaagcaggcgccgccggtcgtg
gtgagcgtggtcacagtcgcgccggagacgctgcgcatcgtcagcgatctgcccggccgc
atcgcaccgacgcggatcgccgaggtgcgtccgcgggtctcgggcatcatcatcgagcgc
gtgttccagcaaggtaccatcgtcaagcagggcgacgtactgtaccggctggacccggcg
ccgttccaggttcgtgtcgccagcgccaaggcgacgctgcagcgtgcagtggcaacccgc
acgctggcggcccagcaggccgagcgccagacccggctgaaggatcgcgacgtcaccaca
gtccaactctacgacaaggcagtcgccgaattggcccaggccgaggcggatgaggcctcc
gcacgcgccggcctgcaggccgccgagctcgatctgcaatacaccgaagtccgcgcaccg
atcaccggccgcatcggacgggcgctgatcaccgaaggcgcactgttcaccgtcggtggc
agcgaaagcctggcgacgattcagcagctcgatccggtctatgccgacttcacgcagtct
gccaacgagctattggcgctgaagcgggccgcgcaacagtcggcgaaggccggcgatgcg
atcgaagcagaggtgcgcctgcggttcgacgatggcgcgagctacgcgcatcgcggccgc
ctcttgttctctgaagcttccgtcgacgccaccactggccaggtcacgctgcgcggcgag
tttcctaatccggacggcgatttgttgcccggcatgtatgtccgcgtgcagctggtgcag
ggcgagcagcccaatgcgctggccgtgcccgagcgcgcgctccgccgcgatccgggcggg
caggcgcagctctacgtcgtctcggccgatcgcaaagccgagttgcggccggtgacgccg
tcgcggctggtcgatggtcgctggatcatcgcgagcggtctccatcccggcgatgccgtc
gtcgtgcagggctttcaggctctgtcgccgggagcggcggtcgatccgaagccgtggccg
aacgcggcggccgctggtacgaccagcgccgcctcgcaggcgaagtga
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