Rhodoferax sp. WC2427: AB3G31_13940
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Entry
AB3G31_13940 CDS
T10716
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3G31_13940 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhof03400
]
AB3G31_13940 (nth)
Enzymes [BR:
rhof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB3G31_13940 (nth)
DNA repair and recombination proteins [BR:
rhof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3G31_13940 (nth)
Prokaryotic type
AB3G31_13940 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XDC17464
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All DBs
Position
2946281..2946937
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AA seq
218 aa
AA seq
DB search
MKRDAIAGFFATLQAANPMPVTELEYTSVFELLTAVLLSAQATDVGVNKATRRLFPVAHT
PQAILDLGLDGLEGYIKTIGLYHSKAKHLLQTCQMLVQLHGGQVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRLGNRTGLAPGKTPAEVEKGLLKRIPPEYLVDAHHWLI
LHGRYICQARKPLCWQCGVAQFCDFQPKTAAEAGTAAG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgacgctattgccggattttttgccaccctccaggccgccaacccgatgccg
gtgaccgagctggagtacaccagtgtgttcgagcttctcaccgccgtgctgctgtcggcc
caggccaccgacgtgggggtcaacaaggccacccgccgtctgttccccgtggcccacacg
ccccaggccattctggacctgggactggacgggctggagggctatatcaagaccatcggc
ctgtaccacagcaaggccaaacacctgctgcaaacctgccagatgctggtgcaactgcac
ggcggccaggtgccacgcacccgcgaggcgctggaggccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacgtggcttttggcgagcccaccatggcggtggatacgcac
atctttcgcctgggcaaccgcaccgggctggccccgggcaagaccccggcggaggtggaa
aaaggcttgttgaagcgcattccacctgaatacctggtggacgcacaccattggctgatc
ctgcatggccgctacatatgccaggcccgcaagccgctgtgttggcagtgcggcgtggcc
cagttctgcgactttcagcccaagacggcggcggaggcgggtacggcggcgggctga
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