Rhodococcus sp. H-CA8f: CPI83_26490
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Entry
CPI83_26490 CDS
T10533
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhoh Rhodococcus sp. H-CA8f
Pathway
rhoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPI83_26490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoh03400
]
CPI83_26490 (nth)
Enzymes [BR:
rhoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPI83_26490 (nth)
DNA repair and recombination proteins [BR:
rhoh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPI83_26490 (nth)
Prokaryotic type
CPI83_26490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ATI35217
LinkDB
All DBs
Position
complement(5702368..5703153)
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AA seq
261 aa
AA seq
DB search
MQTTPTGSSEQRKKPRSGGARKEESHLGLVRRARRMNRELAVAFPHVYCELDFTTPLELA
VATILSAQCTDVRVNMVTPALFARYPDAKAYAEADRTELEEYIRSTGFYRNKTTSLIGLG
QALLERHDGQVPNKLEDLVKLPGIGRKTANVVLGNAFDIPGITVDTHFGRLVRRWKWTEE
EDAVKVEHAVGALIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTDK
TEAAALVKGPETDHLLALAGL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaccaccccgacaggcagttcagagcagcggaagaaaccgcgttcggggggtgcg
cggaaggaagaatcacacctcggattggtacgccgggcgcgtcggatgaatcgcgagctc
gctgtggctttcccgcacgtgtattgcgaactcgacttcacgactccgttggaactggca
gtggcgacaatcctgtcggcgcaatgcaccgacgtccgcgtcaacatggtcacgccggcg
ctcttcgcccgctatcccgacgcgaaggcatacgcggaagccgatcggaccgaactcgag
gagtacatccgctccaccggcttctaccggaacaagacgacgtcgttgatcggactcggt
caggcgctactcgaacgccacgacggtcaggtcccgaacaagctcgaagatctggtgaaa
ctcccaggcatcggacgcaagaccgcgaacgtcgtgctgggcaatgccttcgacatcccg
ggaatcaccgtcgacacccacttcggtcggctcgtgcgtcggtggaagtggaccgaggaa
gaagatgccgtcaaggtggaacacgccgtcggggcactgatcgaacgtaaggaatggaca
ctgctctcgcaccgcgtgatctttcacggccgacgggtctgccacgcgcgcaagcccgcg
tgcggggtgtgcgttctcgccaaggactgcccgtcgtacggactcggcccgaccgacaaa
accgaggccgcggccctggtgaaaggccccgagaccgaccatctgctcgccctggcaggg
ttgtga
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integrated database retrieval system
