Rhodococcus sp. JVH1: JVH1_31020
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Entry
JVH1_31020 CDS
T10360
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhoj Rhodococcus sp. JVH1
Pathway
rhoj00300
Lysine biosynthesis
rhoj00550
Peptidoglycan biosynthesis
rhoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JVH1_31020
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JVH1_31020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoj01011
]
JVH1_31020
Enzymes [BR:
rhoj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JVH1_31020
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoj01011
]
Precursor biosynthesis
Amino acid ligase
JVH1_31020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF4259
Motif
Other DBs
NCBI-ProteinID:
XEM92507
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Position
1:6666613..6668103
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AA seq
496 aa
AA seq
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MSVDCPRCTPPKLLREMVRRLDCSAALSGSGEAAVTGISQDSRLVRAGDVYAALPGRHRH
GIEFAGEAAARGAVAMLSDRGSDVLPTIVVDDPRRALGPLAAWVYGNPSEALDVYGVTGT
NGKTSTAYLLDAGLRAAGVGTGMMTGIAVRGPNGSRTATRTTPEACELQQTLAAFAEHRI
GAVAMEVSSHGLALHRIDGTSFRVGVFTNLARDHLDFHPDMDAYFAAKARLFEPGRCAAA
AVGVDDEFGRRLAATVTVPRVTFSSRTTAADFHASAVHADEGGTSFTLHGAGARKPVRLR
LLGVHQVDNALAAIAALAVRGVDLDSAVAGIESLDTVPGRLEAVDAGQPFLAFVDYMHNP
AGQRRLFPYLRSLTRGRVIAVVGATGERDPGKRVPLGATAARFADTVIVTDESPYSDDAQ
RLREDVARGALSGDAEVLVVPDRAEAIVAAVTLAAPGDVVVVAGRGHDRVQAYGPRRRVF
DDRIALHEALLRLVAR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgactgcccgcggtgcactccgccgaagctgctgcgcgagatggtgcgccgc
ctcgactgctcggcggcactctccgggtccggcgaggcagcggtgacgggtatcagccag
gactctcgtctcgtccgggccggcgacgtgtacgcggcgctgccggggcggcaccggcac
gggatcgagttcgcgggcgaggccgcggcgcgcggtgctgtcgcgatgctcagcgaccgc
gggtcggacgtgctgccgacgatcgtggtggacgatccgcgtcgtgctctcggtccgttg
gcagcgtgggtgtacggcaatccgtccgaggcactcgacgtctacggtgtgacggggacg
aacgggaagaccagcaccgcgtatctcctggacgcgggattgcgtgcggcgggtgtcggc
accggcatgatgacggggatcgccgtccggggaccgaacgggtcacgcaccgcgacccgg
actactccggaggcgtgcgagctccagcagaccctcgccgcgttcgccgagcatcggatc
ggcgcggtcgcgatggaggtgtcgagccacggtctcgctctgcaccgtatcgacggaacg
tcgttccgggtgggggtgttcaccaacctcgcccgcgaccatctggactttcaccccgac
atggacgcgtatttcgcggcgaaggcccgattgttcgaaccggggcgctgcgccgcggca
gccgtcggcgtcgacgacgagttcgggcgccgcctcgccgccaccgtcaccgtgccccgc
gtgacgttctcgtcgaggacgacggcggccgacttccatgcgtccgccgtgcacgcggac
gagggcggcacgtcgttcaccctccacggcgccggggcgcggaaaccggtgcggctccgg
ctactcggagtgcaccaggtggacaacgcactcgcggcgatcgccgccctcgcggttcgc
ggggtggacctcgactcggcggtcgccgggatcgagagcctcgatacggtgcccggacgc
ctggaggcggtggacgcgggccagccgttcctcgcgttcgtcgactacatgcacaacccg
gccggtcagcgacgtctgtttccgtacctccgctcgctgacgcgaggccgggtcatcgcc
gtcgtcggggcgaccggtgagcgcgaccccggcaagcgggtgccgctcggtgcgaccgcg
gcccgtttcgccgacacggtcatcgtcaccgacgagagtccgtactccgacgacgcgcag
cgtctgcgcgaggatgtggcgcgaggtgcactcagtggcgacgccgaagtgctcgtcgtg
cccgaccgcgccgaggcgatcgtcgccgctgtcaccctcgccgcgccgggcgacgtcgtg
gtggtcgcaggccgtgggcacgaccgggtacaggcgtacgggccgcgccgacgtgtgttc
gacgaccggatcgcactccacgaggcactcctgcggctcgtcgcgcgctag
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