Rhodopseudomonas sp. BAL398: RBJ75_16345
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Entry
RBJ75_16345 CDS
T10316
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol01501
beta-Lactam resistance
rhol01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBJ75_16345
01503 Cationic antimicrobial peptide (CAMP) resistance
RBJ75_16345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhol03036
]
RBJ75_16345
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhol02000
]
RBJ75_16345
01504 Antimicrobial resistance genes [BR:
rhol01504
]
RBJ75_16345
Chromosome and associated proteins [BR:
rhol03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RBJ75_16345
Transporters [BR:
rhol02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RBJ75_16345
Antimicrobial resistance genes [BR:
rhol01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RBJ75_16345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
HH_EMRA
YknX_C
HH_YBHG
BSH_YhbJ
HH_CzcB
TPR_MLP1_2
Peptidase_S15
HH_AprE
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WOK20734
LinkDB
All DBs
Position
3462335..3463534
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AA seq
399 aa
AA seq
DB search
MLNGCGGQDQTAQQGNPPRPEVSVVTLHPQSVAITTELAGRTTASLTAEVRPQVNGIIQA
RLFKEGSEVAAGAALYQIDPASYQAAYDSAVAAQQKAEATVPSAAAKVERYQGLVKQNAV
SKQDFDDAVATLAQAKADVASAKASVETARINLEYTKIVAPIDGRIDKSSLTPGALVTAG
QTTALTTIRKLDPINVDVTESSTNLLNWRQAVKEGRIKFSGPDVSIKLKLDNGTVYSHTG
KFAFVESNVSETTGTFALRAEFPNPDRLLLPGMYVRAIIEEGIAENSFVVPQRGVTRNTK
GEATALIVTPEGKVEQRVLTVGRNVGNNWLASAGVKDGDRVIVEGTQLVRPGQDVTAVEV
SIDENTGEVRARKQGALSPSTPVRFAQRDDGSTAAAAGH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacggttgcggcggtcaggatcaaaccgcgcagcagggcaacccgccgcggccg
gaagtcagcgtggtgaccctgcatccgcaatcggttgcgatcacgaccgagctcgcgggg
cgcacgacggcgtcgttgaccgcggaggtgcggccgcaggtcaacggcatcatccaggcg
cggctgttcaaggaaggcagcgaggtggcggcgggcgcggcgctgtatcagatcgatccg
gcgagctatcaggcggcctatgacagcgcggtagcggcgcagcagaaggcggaagcaacg
gtgccgagcgcggccgcaaaggtcgagcgctatcagggcctggtcaagcagaacgcggtg
agcaagcaggactttgacgacgcggtggcgacgctggcgcaggccaaggctgacgtcgcc
tccgccaaggccagcgtcgagaccgcccgcatcaatctggaatacaccaagatcgtggcg
ccgatcgacggccggatcgataaatcgtcgctcactcccggggcgctggtgacggcgggt
cagaccaccgcgctgaccacgatccgcaagctcgatccgatcaatgtcgacgtcaccgaa
tccagcaccaatctgctgaactggcggcaggcggtcaaagagggccggatcaaattcagc
ggtccggacgtcagtatcaaactgaagctcgataacggaacggtctattcgcataccggg
aagttcgccttcgtcgagtccaacgtcagcgagacaaccggcaccttcgccttgcgcgcc
gagttccccaatccggatcgcctgctgctgcccggcatgtatgtgcgggcgatcatcgag
gaaggcatcgccgagaacagcttcgtggtgccgcaacgcggcgtcacccgcaacaccaag
ggcgaagccaccgcgctgatcgtcaccccggagggcaaggtggagcagcgggtgctgacg
gtcggcaggaatgtcggcaacaactggctcgccagtgccggcgtcaaggacggcgaccgc
gtcatcgtcgaaggcacccaattggtgcgccccggccaggacgtcaccgctgtcgaagtc
agcatcgacgagaacaccggcgaggtgcgggcccgcaagcagggcgcgttgtcgccatcg
acacccgtccgattcgcccagcgcgatgacgggtcgaccgccgccgcggccgggcactga
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