Rhodopseudomonas sp. BAL398: RBJ75_20415
Help
Entry
RBJ75_20415 CDS
T10316
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBJ75_20415 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhol03400
]
RBJ75_20415 (nth)
Enzymes [BR:
rhol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBJ75_20415 (nth)
DNA repair and recombination proteins [BR:
rhol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBJ75_20415 (nth)
Prokaryotic type
RBJ75_20415 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Extensin_1
ASFV_J13L
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WOK20771
LinkDB
All DBs
Position
4322492..4323319
Genome browser
AA seq
275 aa
AA seq
DB search
MPKISPAAAPKSKSGAKKAVSAKPVATKPVTAKPVTAKPATAKPATAKSVIAKPPRPKPA
KKARRWSAAEVREAFSRFAAANPEPKGELEHLNPFTLLVAVVLSAQATDAGVNKATRRLF
ELADTPQKMLDLGEEEVRELIKTIGLYRNKARNVIALSQKLIEQFGGAVPRSRAELEKLP
GAGRKTANVVLNMAFGQPTMAVDTHVFRVGNRTGLAPGDTPLAVELELERVIPAEFMMHA
HHWLILHGRYTCLARKPRCEVCLIADLCRWPEKTV
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaatcagcccagccgccgcgccgaaatcgaagtctggcgcgaagaaggccgtc
tcggccaaacccgttgcgaccaagcctgtcacggccaagcctgtcacggccaagcctgcc
acggccaagcctgccacggccaagtccgtcatagccaagcctccgcggccaaagcccgcg
aaaaaagcccgccgctggagcgccgccgaggtgcgcgaggcattcagccgctttgccgcc
gccaatccggagccgaagggcgagctcgagcacctcaatccgttcaccctgctggtcgcg
gtggtgttgtcggcgcaggccaccgatgccggcgtcaacaaggcgacccgcagattgttc
gaactcgccgacacgccgcaaaagatgctggatctcggcgaggaggaggtgcgcgagctg
atcaagaccatcggcctgtatcgcaacaaggccaggaacgtgatcgcgctgtcgcaaaag
ctgatcgagcaattcggcggcgcggtgccgcgtagtcgcgccgaattggagaaactgccg
ggcgccgggcgcaagaccgcgaatgtggtgctcaacatggcgttcggccagcccaccatg
gcggtcgacacccatgtgttccgggtcggcaatcgcaccgggctggcgccgggcgacacg
ccgctggcggtcgagctcgaactcgaacgggtgattccggcagaattcatgatgcacgcc
catcactggctgatcctgcacggccgctatacgtgtctcgcgcgcaagccgcgctgcgag
gtctgcctgatcgccgatctgtgccgctggccggaaaagacggtttag
DBGET
integrated database retrieval system
