Rhodopseudomonas sp. BAL398: RBJ75_25065
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Entry
RBJ75_25065 CDS
T10316
Name
(GenBank) class III extradiol dioxygenase family protein
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
rhol Rhodopseudomonas sp. BAL398
Pathway
rhol00362
Benzoate degradation
rhol00624
Polycyclic aromatic hydrocarbon degradation
rhol00627
Aminobenzoate degradation
rhol01100
Metabolic pathways
rhol01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhol00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RBJ75_25065
00627 Aminobenzoate degradation
RBJ75_25065
00624 Polycyclic aromatic hydrocarbon degradation
RBJ75_25065
Enzymes [BR:
rhol01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
RBJ75_25065
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
WOK17351
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Position
5330721..5331578
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AA seq
285 aa
AA seq
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MARIVGGLAASHVPAIGGAMAKGLQKDPYWAPFFDGFDATHHWLDEVAPDAAVVIYNDHG
LNFFLDKMPTFAVGAAPDYRNADEGWGLPVLAPFTGDTALSWHIIETLIDAEFDPVTCQE
MLVDHAFSLPMELFFRDRAHAIPAVPVVVNTVQHPLPTLRRCFNLGQAIGCAIESYPQDL
KVVVIGTGGLSHQLEGERAGFINKEFDKRCMDAMTGDIESILRINQRDLVELAGSQGVEV
MNWVAMRGALLGDVHELHRNYHLPISNTASGIMLLENRPKLAQAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcgtcggtggattggccgcgtcccatgtgcccgcgatcggcggagcaatg
gccaagggcttgcaaaaggatccgtactgggcgccgttcttcgacggcttcgacgccacc
catcactggctcgacgaggtcgcgcccgacgccgccgtggtgatctacaacgaccacggc
ctcaatttcttcctcgacaagatgccgaccttcgcggtcggcgccgcgcccgactatcgc
aacgccgacgagggctggggcctgccggtgctggcgccgttcaccggcgacaccgcattg
tcgtggcacatcatcgagacgctgatcgatgccgaattcgatcccgtcacctgccaggag
atgctggtcgatcacgccttcagcctgccgatggaattgttcttccgcgaccgcgcccat
gcgatccccgccgtgccggtggtggtcaacaccgtgcagcacccgctgccgacgctcagg
cgctgcttcaatctcggccaggcgatcggctgcgccatcgagagctatccgcaggatctc
aaggtggtggtgatcggcaccggcgggctgtcgcaccagctcgaaggcgagcgcgccggc
tttatcaacaaggagttcgacaagcgctgcatggacgcgatgaccggcgacatcgagtcg
attctgcgcatcaaccagcgcgacctggtcgaactggccggcagccagggcgtcgaggtg
atgaattgggtagcgatgcgcggcgcgctgttgggcgatgtccacgagctgcaccgcaac
tatcatctgccgatctccaacaccgcctcgggcatcatgctgctggaaaaccgcccgaag
ctggcgcaggccgcgtga
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