Rhodococcus sp. DN22: RA302_02550
Help
Entry
RA302_02550 CDS
T09949
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RA302_02550 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoo03400
]
RA302_02550 (nth)
Enzymes [BR:
rhoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RA302_02550 (nth)
DNA repair and recombination proteins [BR:
rhoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RA302_02550 (nth)
Prokaryotic type
RA302_02550 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WVX71135
LinkDB
All DBs
Position
550075..550860
Genome browser
AA seq
261 aa
AA seq
DB search
MQTTPTGSSEQRKKPRSGGARKEESHLGLVRRARRMNRELAVAFPHVYCELDFTTPLELA
VATILSAQCTDVRVNMVTPALFARYPDAKAYAEADRTELEEYIRSTGFYRNKTTSLIGLG
QALLERHDGQVPNKLEDLVKLPGIGRKTANVVLGNAFDIPGITVDTHFGRLVRRWKWTEE
EDAVKVEHAVGELIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTDK
TEAAALVKGPETDHLLALAGL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaccaccccgacaggcagttcagagcagcggaagaaaccgcgttcggggggtgcg
cggaaggaagaatcacacctcggattggtacgccgggcgcgtcggatgaatcgcgagctc
gctgtggctttcccgcacgtgtattgcgaactcgacttcacgactccgttggaactggca
gtggcgacaatcctgtcggcgcaatgcactgacgtccgcgtcaacatggtcacgccggcg
ctcttcgcccgctatcccgacgcgaaggcatacgcggaagccgatcggaccgaactagag
gagtacatccgctccaccggcttctaccggaacaagacgacgtcgttgatcggcctcggt
caggcgctactcgaacgccacgacggtcaggtcccgaacaagctcgaagatctggtgaaa
ctcccaggcatcggacgcaagaccgcgaacgtcgtgctgggcaatgccttcgacatcccg
ggaatcaccgtcgacacccacttcggtcggctcgtgcgccggtggaagtggaccgaggaa
gaagatgccgtcaaggtggaacacgccgtcggggaactgatcgaacgtaaggaatggaca
ctgctctcgcaccgcgtgatctttcacggccgacgggtctgccacgcgcgcaagcccgcg
tgcggggtgtgcgttctcgccaaggactgcccgtcgtacggactcggcccgaccgacaaa
accgaggccgcggccctggtgaaaggccccgagaccgaccatctgctcgccctggcaggg
ttgtga
DBGET
integrated database retrieval system
