Rhodococcus sp. DN22: RA302_15120
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Entry
RA302_15120 CDS
T09949
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rhoo
Rhodococcus sp. DN22
Pathway
rhoo00270
Cysteine and methionine metabolism
rhoo00450
Selenocompound metabolism
rhoo00670
One carbon pool by folate
rhoo01100
Metabolic pathways
rhoo01110
Biosynthesis of secondary metabolites
rhoo01230
Biosynthesis of amino acids
rhoo04980
Cobalamin transport and metabolism
rhoo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RA302_15120 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RA302_15120 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RA302_15120 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RA302_15120 (metH)
04980 Cobalamin transport and metabolism
RA302_15120 (metH)
Enzymes [BR:
rhoo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RA302_15120 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
CdhD
Tautomerase_2
Motif
Other DBs
NCBI-ProteinID:
WVX67883
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Position
complement(3303673..3307242)
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AA seq
1189 aa
AA seq
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MSAPFNSALLDALKQRVVIGDGAMGTMLQAADLTLDDFLGLEGCNEILNDTRPDVLKDIH
RAYFAAGADAVETNTFGCNLPNLADYDISHRIRELAEKGTALAREVADEMGPGRDGMARF
VLGSMGPGTKLPSLGHAPYAVLRDAYTEAALGMIDGGADAILVETCQDLLQVKAAILGSQ
RAMEQLGLRLPIITHVTVETTGTMLLGSEIGAALTALEPLGIDMIGLNCATGPAEMSEHL
RHLSKYSTLPVSVMPNAGLPQLGPKGAEYPLTADELAEALSGFVSEFGLGLVGGCCGTTP
EHISAVADAVRQVEKAQRTPIHEPSTSSLYSAVPFEQDASILMIGERTNSNGSKAFREAM
LSADYQKCLDIAKDQTRDGAHMLDLNVDYVGRDGAADMSELASRLATSSTLPIMLDSTEP
AVLQAGLEHLGGRCAVNSVNYEDGAGPESRFHKIMTLVKEHGAAVVALTIDEEGQARTAE
TKVAIAKRLIEDIKGNWGLAESDIIVDALTFPISTGQEEVRRDGIETIEAIRQLKAAYPE
LHFTLGISNISFGLNPAARQVLNSVFLHECTEAGLDTAIVHASKILPMARIPDEQRETAL
DLVYDRRSEGYDPLQKLMALFEGVSAASARESRAQELAGLPLFDRLERRIVDGERNGLDD
DLTEAMTIKPPLAIINETLLSGMKTVGELFGSGQMQLPFVLQSAEVMKAAVAFLEPHMEA
SDEDGKGRIVIATVKGDVHDIGKNLVDIILSNNGYEVVNIGIKQPIATILDVALDKKADV
IGMSGLLVKSTVVMKENLQELNARGVAEKFPVLLGGAALTRSYVENDLQEVYEGDVSYAR
DAFEGLNLMDQIMTTKRGGGPAPDSPEAIAAREKAAERKARHERSKRIAEKRKAAAVPVV
LPERSDVAADIAVPTPPFWGSRIVKGISLSEYSGLLDERALFLGQWGLRGQRKGDGPTYE
ELVESEGRPRLRYWLDRLTSEGILAHAAVVYGYFPAISEGDDVIVLTEPKPDAPERFRFT
YPRQHRDRFLCIADFVRSRKDAEATGQVDVLPFQLVTMGQPIADFANELFASNSYRDYLE
VHGIGVQLTESLAEYWHRRVREELVLPEGHTVAEQDPTEVAGYFDLEYRGARYSFGYGAC
PDLEDRAKLVALLEPERIGVELSEELQLHPEQSTDAFVLHHPEAKYFNV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccatttaactctgccctgcttgatgcgctgaaacagcgcgttgtcatcggc
gacggagcgatgggcaccatgttgcaggccgcggacctcaccctggacgacttcctcggc
ctcgaggggtgcaatgagatcctcaacgacacccgtcccgacgtgctcaaagacatccac
cgtgcgtacttcgccgctggtgccgatgccgtcgagaccaacaccttcggttgcaacctg
cccaacctcgccgactacgacatctctcaccggatccgcgaactcgcggaaaaaggcact
gctctcgcccgtgaagtagcggacgagatgggaccaggccgcgacggcatggcccgattc
gtactcggctcgatgggaccgggaaccaagctccccagcctgggacacgcaccgtacgca
gtcctgcgtgacgcgtacaccgaagctgcgctcggcatgatcgacggtggcgccgacgcc
atcctcgtcgaaacctgccaggacctgcttcaggtgaaagctgcaatcctcggcagccag
cgtgcgatggagcaactcggactgcggttgccgatcatcacgcacgtgacggtcgagaca
accggaacgatgctcctgggcagtgagatcggtgcggcgctgacggcactcgagccactc
ggtatcgacatgatcggtctgaactgtgccaccgggccggccgagatgagtgaacatctc
cgtcatctgtccaagtactccacgctgccggtgtcggtcatgcccaatgccggcctgccg
cagctcggccccaagggtgccgagtatccgctgactgccgacgaattggccgaagccctc
agtggtttcgtctccgagttcggactcggcctcgtcggtggctgctgcggtacgacgccc
gagcacatcagcgcggtcgccgacgcggttcgtcaggtcgagaaggcccagcgcacgccg
atccacgagccgagcacctcttcgctgtactcggcggtgccgttcgagcaggacgccagc
atcctgatgatcggcgaacgcacgaactccaacggctccaaggctttccgcgaggcgatg
ctctccgcggactaccagaagtgcctggacatcgccaaggaccagacccgcgacggcgca
cacatgctcgacctcaacgtcgactacgtgggccgcgacggtgccgccgacatgtcggaa
cttgccagccgcctggcgacgtcctcgacgctgccgatcatgctcgactccaccgagcct
gccgtgctgcaagccggcctcgagcacctcggtggccgctgcgccgtcaactccgtcaac
tacgaagacggcgccggccccgaatcgcgtttccacaagatcatgactctggtcaaggag
cacggcgcggcggtcgtcgccctgaccatcgacgaagagggccaggctcgcaccgccgag
acgaaggtcgccatcgccaagcgtctgatcgaggacatcaagggaaactggggactcgcc
gagtccgacatcatcgtcgacgccttgaccttccccatctccaccggtcaggaagaggtg
cgacgcgacggcatcgagaccatcgaagccatccgtcagctcaaggctgcgtacccggaa
ctccacttcaccctgggtatctcgaacatctcgttcggtttgaacccggccgcacggcag
gttctcaactcggtgttcctgcacgagtgcaccgaggcaggtctggacacggcgatcgtt
catgcttccaagattctgccgatggcccgaattcctgacgagcagcgtgaaaccgcactc
gacctcgtctacgaccgtcgtagcgaggggtacgacccgctgcagaagctgatggctctg
ttcgagggtgtctcggctgcgtcggcgcgcgagtcccgtgcgcaggaactggcgggactt
ccgttgttcgaccggctcgaacgccgcatcgtcgacggcgagcgcaacggcctcgacgac
gacctcaccgaggcgatgacgatcaagcctccgctggccatcatcaacgagaccttgctc
tcgggcatgaagaccgtcggcgagctgttcggctccggacagatgcagttgccgttcgtg
ttgcagtcggccgaggtcatgaaggctgccgtggcattcctcgaaccgcacatggaagcg
agcgacgaggacggcaagggtcgcatcgtgatcgcgaccgtcaagggcgacgttcacgac
atcggcaagaacctggtcgacatcatcttgagcaacaacggctacgaggtcgtcaacatc
ggtatcaagcagccgatcgcgaccatcctcgacgtcgcgttggacaagaaagccgacgtg
atcggcatgtccggactgctcgtgaagtccactgtcgtgatgaaggaaaacctccaggaa
ctcaacgcacgcggagtcgccgagaagttcccggttctgctcggtggtgcggcgctcacg
cgctcctacgtcgagaacgacctgcaggaggtgtacgagggcgacgtcagctatgcccgc
gacgccttcgagggtctgaacttgatggaccagatcatgacgaccaagcgtggtggcggc
ccggcgccggacagcccggaggccatcgctgctcgcgagaaggctgccgagcgtaaggca
cgtcacgagcgttccaagcgcatcgccgaaaagcgtaaggctgcagcggttcccgtggtc
ctgccggagcgttccgatgtcgcagccgacatcgcggtgccgacacctcccttctggggc
tcgcgcatcgtcaagggaatctcgctgtccgagtactcggggctgctcgacgagcgcgct
cttttcctcggccagtggggccttcgcggtcagcgcaagggcgacggtccgacgtacgag
gaattggtcgagtcggaaggccgtccgcgacttcggtactggctcgatcggttgacgtcc
gagggcatcctcgcgcatgccgcggtcgtgtacgggtacttcccggcgatctcggagggc
gacgacgtcatcgtgctcaccgagccgaaaccggatgcacccgaaaggttccggttcacc
tacccgcgccagcaccgcgaccgcttcctgtgcatcgcggacttcgttcgctcgcgcaag
gacgccgaggccaccgggcaggtcgacgtactcccgttccagttggtgacgatgggtcag
ccgatcgcggacttcgccaacgagttgttcgcatcgaactcgtaccgcgattacctcgag
gttcacggaatcggtgtccaactcacggaatctctggccgagtactggcatcgacgcgtc
cgtgaagagctagtgcttcccgagggtcacaccgtcgcggagcaggatcccaccgaggtt
gccggttacttcgatctcgagtaccgcggcgctcgttattcgttcggatacggcgcgtgc
ccggatctcgaggatcgagccaagttggttgcgttgctcgaacccgaacgaatcggcgtc
gaattgtccgaggagctgcagctgcatcccgagcagtccacggacgcttttgtcctgcac
cacccggaagcaaagtatttcaatgtctga
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