Rhodococcus sp. P1Y: D8W71_18745
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Entry
D8W71_18745 CDS
T09477
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop00300
Lysine biosynthesis
rhop00550
Peptidoglycan biosynthesis
rhop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D8W71_18745
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D8W71_18745
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhop01011
]
D8W71_18745
Enzymes [BR:
rhop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
D8W71_18745
Peptidoglycan biosynthesis and degradation proteins [BR:
rhop01011
]
Precursor biosynthesis
Amino acid ligase
D8W71_18745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
ADH_zinc_N_2
LacI
Motif
Other DBs
NCBI-ProteinID:
AYJ49996
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Position
complement(4078697..4080298)
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AA seq
533 aa
AA seq
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MSVPAEPQPARSSFRPSRPPQTSVEDLAAVAGATLQPVSDGTHRLVTGVDLRAQGILDGD
LFAALPGASAHGASFAADAVERGAAAILTDAVGLDFVREQFAQLPVPVLVHERPRSVLGL
LSASIYGNPSDKMTVIGITGTSGKTTTSYLLEAALTAAGRRTGLIGTIETKIPGLRVPSA
LTTPEAPHLHALFALMLERGIDTVVMEVSSHALSLGRVDGTVFAVGAFTNLSQDHLDYHG
TLEEYFLAKSRLFAADSRVSTRSAVVCIDDEWGRRMADIAADAGSSLLTVSVNFSSDWSV
KDWSKDPAGTQTFTVVEPTGESHPASIRLPGRYNVANAILAAATCAAAGVDVQRAIGGMA
EVDVPGRVQRISRGQKFLAVVDYAHKPAAVEAVIDTLREQTTGRIAVVLGAGGDRDRAKR
PLMGAAGASGADLLVITDDNPRSEDPAAIRDAVEAGALGVEADRRGEVRKIAGRGEAIAN
AVEWAQDGDVVLIAGKGHETGQDIGGVKYPFDDRVVLAAAIDRKITEHAGAGS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtgccagcagaaccgcagcctgcgcgatcctcgttccgaccgtcgaggccaccg
cagacgtcggtcgaggatctcgccgcggtagcgggagcgactctccaaccggtgtcggac
ggaacgcaccgcctcgtcacgggcgtggatctccgtgcccaaggaattctcgacggcgac
ctgttcgccgcgctcccgggagcctcggctcacggggcctcgttcgcagccgacgcagtc
gagcgcggtgccgccgcgatcctgaccgatgctgtcggcctcgacttcgtgcgcgagcag
ttcgcacagctaccggtgccagttctcgtccacgagcgaccgcggtcggtgctcggtctg
ctttcggcgtcgatctacggtaatccgtcggacaagatgacggtcatcggaatcacggga
acgtcgggcaagacgacaacgtcctacttgttggaagccgcgctgaccgccgcaggacgt
cggaccggcctgatcggcacgatcgagaccaagatcccgggcctgagagtccccagtgcc
ctgaccacgcccgaggcaccacacctgcacgcgttgttcgcattgatgctcgagcgcgga
atcgacacggtggtcatggaagtctcgagtcacgcgctctcgctcggacgggtcgacggg
acggtcttcgcggtcggtgcattcaccaatctttcgcaggatcatctggattaccacggc
actctcgaggagtattttctggccaagagtcggctgttcgccgcggactctcgggtgagc
acgcgatcggccgtggtgtgcatcgacgacgagtggggtcggcgtatggctgacatcgct
gccgacgccggatcctccctgctgaccgtgtcggtgaacttcagctccgattggtcggtg
aaggactggtcgaaggatccagctgggacgcaaacgttcaccgtggtcgagcccacagga
gaaagtcatccggcgtcgataagactgcccggacggtacaacgtcgcgaatgcgatcctg
gctgccgcaacgtgtgccgcagcaggtgtcgacgttcagcgcgcgatcggtgggatggcg
gaggtcgacgttcccggtcgggtccagaggatctcgcgcggccagaagtttctcgccgtg
gtggactacgcgcacaagccggcagcggtggaggccgtcatcgacacccttcgggaacag
accacgggccggatagccgtcgtactcggcgccgggggagaccgcgatcgcgcaaagcgg
ccactgatgggtgctgctggtgcgtcgggagcggacctgttggtgatcaccgacgacaac
ccccgttccgaggatcccgccgcgatcagagacgccgtcgaagccggtgcgctcggtgtc
gaggcggaccgacgcggagaggtcaggaaaatcgccggacgcggtgaggcgatcgcgaat
gcggtcgagtgggcacaggacggtgacgtcgttctcatagcgggcaagggacacgaaacc
ggccaggacatcggcggagtcaagtatcccttcgacgacagagtcgtgctggccgccgcc
atcgatcgcaagatcaccgaacacgcaggagccggctcgtga
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