Rhodococcus sp. PAMC28707: E5720_19775
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Entry
E5720_19775 CDS
T11377
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rhpc Rhodococcus sp. PAMC28707
Pathway
rhpc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhpc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E5720_19775
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhpc01007
]
E5720_19775
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhpc03016
]
E5720_19775
Enzymes [BR:
rhpc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
E5720_19775
Amino acid related enzymes [BR:
rhpc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
E5720_19775
Transfer RNA biogenesis [BR:
rhpc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E5720_19775
Prokaryotic type
Other AARSs
E5720_19775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QCB60376
LinkDB
All DBs
Position
4341108..4344242
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AA seq
1044 aa
AA seq
DB search
MTDDQTSIRDSYPLVDIYGTKAGSVSFPELEAKVLDAWAADGTFRASVENREGAEEFVFY
DGPPFANGLPHYGHLLTGYVKDLVPRFQTMRGMKVERRFGWDCHGLPAELEAEKQLGIKD
KSEIDEMGLAKFNAYCKQSVLKYTDEWRDYVTRQARWVDFDNDYKTLDLDFMESVMWAFK
TLHDKGLIYQGFRVLPYSWYEQTPLSNQETRLDDAYKMRQDPAVTVRMALSAPGSPLDGA
DALIWTTTPWTIPSNLAMAVRPDIDYVQVEDGAGGRVVLARDRVAHYARELGENPTVLSE
HTGADLVGLKYTPPFDFFIGHPNSHRVLSADYVTTDSGTGIVHLAPAFGEEDMDVATANG
IEVVQPLDPGGKFTSMVPPYEGLMVFDANPVIIKDLKASGRLLRHETIEHSYPHSWRSGQ
PLIYMAVPSWFVAVTKFRDRMVELNQEIAWVPEHIKDGQFGKWLAGARDWNISRNRYWGS
PIPVWTSDDPAYPRLDVYGSLDDLERDFGVRPTDLHRPYIDDLTRPNPDDPTGNSTMRRV
PEVLDCWFESGSMPYAQVHFPFENEEWFATHNPGDFIVEYNGQTRGWFYTLHVLATALFD
RPAFKTVAAHGIVLGDDGLKMSKSKGNYPDVKEVFDRDGSDAMRWFLMSSPILRGGNLVV
TEQGIREGVRQALLPIWNAWSFLQLYADKPGTWRTDSPHVLDRYVLAKLAATRDAITEAL
EGNDIAGACDELRVFCDALTNWYVRRSRSRFWSENVDAIDTLHTVLEVLTRIAAPLLPLI
SEVVWRGLTGGRSVHLMDWPDAGELPSDPELVDSMDEVRTICSTVLGLRKAQNLRVRLPL
PEVTVAAENAERLRPYADIIADEVNVKKVDLTEDVAVHGKFELVVNARAAGPRIGKDVQK
VIKAVKAGEWSEDANGVVSAAGIELLPSEYTRKLVAAEPDSTAALPGNAGLVVLDSNVTA
ELEAEGWAKDRIREFQDARRNLGLEVSDRIDIVVEVPADRRDWLDTHRELIKGEVLALTL
VNGDPGPDAIELGEGVRALVSRAR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgatcagacatcgatacgcgattcctacccgcttgtcgacatctacggcacg
aaagccggcagcgtatcgttccccgagctcgaggcgaaggtcctcgatgcatgggccgcg
gatggaactttccgtgccagcgtggaaaaccgtgaaggcgccgaagaattcgtcttctac
gacggccccccgttcgccaacggactgccgcactatggccatcttctgaccggatatgtc
aaggatcttgtgccgcgcttccagacgatgcgtggcatgaaggtcgagcggcgattcggc
tgggactgtcatgggttgccggccgaactcgaagccgagaagcaactcgggatcaaggac
aagtccgagatcgacgagatgggtctggcgaagttcaacgcgtactgcaagcagtcggtc
ctgaagtacaccgacgaatggcgcgactacgtgacccgtcaggcccgctgggtcgacttc
gacaacgactacaagaccctcgacctggacttcatggagtcggtcatgtgggcattcaag
acgctccacgacaaggggctcatctaccagggcttccgcgttcttccgtactcctggtac
gagcagacgccgttgtcgaaccaggagacgcgtctcgacgacgcatacaagatgcgtcag
gatccggccgtcaccgtgcgaatggcgctctccgcgccgggttcgcctctcgatggcgcc
gatgctttgatctggacgacgacgccgtggaccatcccgtcgaatctcgcgatggcggtg
cgtccggacatcgactacgtacaggtcgaggacggagcaggcggacgcgtcgtactcgct
cgtgatcgtgtggctcattacgctcgggagctgggggagaacccgacggtgttgtccgag
cacaccggcgccgatctcgtcgggctgaagtacacgcctccgttcgacttcttcatcgga
catcccaactcgcatcgcgtactgtccgccgactacgtgactaccgattccggtaccgga
attgtgcacttggcgcccgcattcggtgaagaggacatggacgtggcgacggccaacggt
atcgaggtggtgcaaccgctcgatccgggtggaaagttcacctcgatggtgccgccgtac
gagggcttgatggtgttcgatgcgaaccccgtcatcatcaaggatctgaaggcgtccgga
cggttgctgcgacacgagacgatcgagcactcctacccacatagttggcgcagtggtcag
ccgctcatctacatggcggttccgtcgtggttcgtggcggtgaccaagttccgcgaccgc
atggtggagttgaaccaggagatcgcgtgggtccccgaacatatcaaggatggccagttc
ggtaagtggctggccggtgcgcgggactggaacatcagccgaaaccgctactggggtagc
cctattccggtgtggacctcggacgatccggcatatccgaggcttgacgtctatggcagt
ctcgatgatctcgagcgtgatttcggggtgcgcccgactgatctgcatcgtccctacatc
gacgatctgacgcgcccgaatcccgacgacccgaccggtaactcgaccatgcgtcgtgtt
ccggaggtattggactgctggttcgagtccggttcgatgccgtatgcccaggtgcacttt
ccgttcgagaacgaggagtggttcgccactcacaaccccggtgatttcatcgtcgagtac
aacggtcagacacgcggatggttttacacgctgcatgtgttggcgacggctctgttcgat
aggcctgccttcaaaactgttgcagcacatgggatcgtgcttggcgacgacggcttgaag
atgagcaagtcgaaagggaactatccggatgtgaaggaggtgttcgacagggacggttcc
gatgccatgcgttggttcctgatgtcttcgcccatccttcgaggcggaaatctcgtcgtg
accgagcagggcattcgcgagggtgttcgtcaggccctactgccgatctggaacgcgtgg
agctttttgcagttgtacgcagacaagccgggcacgtggcgtaccgattcgccgcatgtt
ctcgatcggtacgtgcttgcgaagctggctgcgacgcgtgatgcgatcaccgaagcgctg
gaaggaaacgacatcgcaggtgcgtgcgacgaactccgcgtgttctgtgatgctttgacc
aattggtatgtgcgacgctcacgttcgaggttttggagtgagaatgtcgatgcgatcgac
acgctccacacggtattggaagttctgacgcggatcgcggctccgcttctgccgttgatc
agtgaagtcgtgtggcgtggtcttaccggcgggcgctcggtgcatctgatggactggcct
gatgcgggtgagctgccgtcggatcccgaactcgtcgattccatggatgaggttcgaacc
atctgctccaccgtgctcggtctacgcaaggcgcagaatcttcgagtgcgcttgccgctg
cctgaggtcaccgtcgctgcagagaacgcggagcggttgcgtccatacgccgacatcatc
gcggacgaggtcaatgtcaagaaggtggatttgaccgaagatgtcgccgtgcacggcaag
ttcgaacttgtcgtcaacgcccgcgcggcaggtccccgcatcggtaaggacgttcagaag
gtcatcaaggcagtcaaggctggggaatggtccgaggacgcgaacggtgttgtcagcgct
gctgggatcgagctgctgccctccgaatacacgcgcaaattggttgctgccgaaccggat
tcgacggcggcgttgcccggaaatgcaggactcgtcgtgctcgactcgaatgtcacagcc
gaactcgaagccgagggttgggcgaaggatcgtatccgcgagttccaggatgcacgtcgt
aacctcgggctggaggtgtcggatcggatcgatatcgtcgtcgaggtaccggctgatcga
cgcgactggctcgacacccaccgggaactcatcaagggtgaggtccttgcgcttaccttg
gtaaatggggatccgggcccggacgcgatcgagcttggcgagggtgtgcgcgcgttggtg
agccgggcgcgatga
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