Rhodococcus sp. PD04: U9J23_06830
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Entry
U9J23_06830 CDS
T11027
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00020
Citrate cycle (TCA cycle)
rhpd00630
Glyoxylate and dicarboxylate metabolism
rhpd00785
Lipoic acid metabolism
rhpd01100
Metabolic pathways
rhpd01110
Biosynthesis of secondary metabolites
rhpd01120
Microbial metabolism in diverse environments
rhpd01200
Carbon metabolism
rhpd01210
2-Oxocarboxylic acid metabolism
Module
rhpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
U9J23_06830
00630 Glyoxylate and dicarboxylate metabolism
U9J23_06830
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
U9J23_06830
Enzymes [BR:
rhpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
U9J23_06830
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
U9J23_06830
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
U9J23_06830
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
U9J23_06830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WSE24005
LinkDB
All DBs
Position
complement(1459528..1463277)
Genome browser
AA seq
1249 aa
AA seq
DB search
MSSSSTSQFGQNQWLVDEMYQRFQDDPSSVDASWHEFLTDYSPEAAVAGGTNGSDTATTE
KPAPSTASAPSSSASAPTKPAPKAETKAAPAKPAPKAETKTAAQPKAQAAPAKPAPKPAA
APSGQATEEKKVLRGAAAAVAKNMNASLSIPTATSVRAVPAKLMFDNRIVINNHLARTRG
GKVSFTHILGYAIVQAVKAFPNMNNHFAEVDGKPNLVVPAHTNLGLAIDLPGKNGQRSLV
VAAIKNCETMNFAQFYSAYEDIVRRARDGKLTGDDFSGVTISLTNPGGIGTVHSVPRLMQ
GQGAIIGAGAMEYPAEFQGASDARIAEMGIGKLLTLTSTYDHRVIQGAESGEFLKKIHEL
LISDDFYDGIFHTLHIPYEPVRWRKDVPEGLVDKHTRVLELIAAYRSRGHLMADTDPLQF
VRDKFRSHPDLDVTTHDLTLWDLDREFNVGGFHGRQKMKLRDVLSVLRDAYCRHVGVEYT
HILEPEQQQWLQERVEAHHVKPTVAQQKYILSRLNAAEAFETFLQTKYVGQKRFSLEGAE
SVIPMMDAIIDQAAEHTLDEVAIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPAAAHG
SGDVKYHLGAEGTYIQMFGDNDIKVSLTANPSHLEAVNPVLEGLVRAKQDILDKGEDGFT
VLPLLLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHIVVNNQVGFTTAPEHSRSSEYCT
DVAKMIGAPIFHVNGDDPEACVWVAKLAVDFREKFHKDVVIDMICYRRRGHNEGDDPSMT
QPAMYDVIDTKRSVRKSYTEALIGRGDISLKEAEDALRDYQGQLERVFNEVRELEKYPPE
PSESVELDQTPPKRLDTSVDRSVLERIGDAFAEAPEGFSVHPRVKPVLEKRREMSRNGKI
DWAFAELLAFGSLAEQGALVRLAGQDSRRGTFTQRHSVIIDRKTGDEYSPLATLANQAGN
GGRFMVYDSALTEFAGLGFEYGYSVGNPDALVLWEAQFGDFVNGAQSIIDEFISSGEAKW
GQLSDVVLLLPHGHEGQGPDHTSGRIERWLQLCAEGSMTVAVPSTPASYFHLLRRHHLDG
IRRPLVVFTPKSMLRNKAAVSNVEDFTQGKFRSLLEEVPYEEGTADRTKATRVLLTSGKI
YWELLAKKQKEGRDDVAIVRIEQLYPVPRRRIAETLEQYPNATEFFWVQEEPANQGAWPF
LGLALPELLPEKLSGIKRVSRRAMSAPSSGSSKVHAVEQQEIIEKAFGR
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagctctacatcacagttcggacagaaccagtggttggttgacgagatgtac
cagcgcttccaggacgacccttcgtccgtggacgcgagttggcacgaatttctgaccgac
tattcgccggaagctgcggtggccggaggtaccaacggttccgacaccgccacgaccgag
aagcccgcgccgagcacagcatctgcgccgagttcctctgcttcggcccccaccaagccc
gcaccgaaggccgagaccaaggccgcaccggccaagcctgccccgaaggcggagaccaag
actgcggcgcagccgaaggcccaggccgcacccgcgaagccggctcccaagcccgccgct
gccccgtcgggccaggccaccgaggagaagaaggttcttcgcggcgccgctgctgccgtt
gcgaagaacatgaacgcctcgctgtcgatcccgacggccaccagtgttcgcgcggtcccc
gcgaagttgatgttcgacaaccgcatcgtcatcaacaaccacctcgcgcgtacccgcggc
ggcaaggtctcgttcacgcacatcctcggttacgcgatcgtccaggcggtcaaggcgttc
ccgaacatgaacaaccacttcgccgaggtcgacggcaagccgaacctcgtcgtgcccgcg
cacacgaacctcggtctcgcgatcgacctgccgggcaagaacggccagcgttcgctggtc
gtggcggccatcaagaactgcgagacgatgaacttcgcgcagttctactcggcctacgag
gacatcgtgcgccgcgcccgcgacggcaagctcaccggcgacgacttctcgggcgtcacg
atctcgctgaccaacccgggcggcatcggcaccgtgcactcggtcccgcgtctgatgcag
ggccagggcgcgatcatcggcgccggcgcgatggagtacccggccgagttccagggtgcg
tccgacgcacggatcgccgagatgggcatcggcaagctgctgacgctcacctccacctac
gaccaccgcgtgatccagggcgcggagtcgggtgagttcctgaagaagatccacgagctg
ctcatcagcgacgacttctacgacggcatcttccacaccctgcacatcccctacgagccg
gtccgctggcgcaaggacgtgccggaaggcctcgtcgacaagcacacccgtgtgctcgag
ctcatcgccgcctaccgcagccgtggccacctcatggccgacaccgatccgctgcagttc
gtgcgcgacaagttccggtcgcatcccgacctcgacgtcacgacccacgacctgacgctg
tgggatctcgatcgcgagttcaacgtcggtggcttccacggccgccagaagatgaagctg
cgcgacgtgctgtcggtgctgcgcgatgcgtactgccgccacgtcggtgtcgagtacacc
cacatcctcgagcccgagcagcagcagtggctgcaggagcgggtcgaggcgcaccacgtc
aagccgacggtcgcccagcagaagtacatcctgagccgcctcaacgccgccgaggcgttc
gagacgttcctgcagaccaagtacgtcggccagaagcgcttctcgctcgagggcgccgag
tccgtcatcccgatgatggacgcgatcatcgaccaggccgccgagcacacgctcgacgag
gtcgcgatcgcgatgccgcaccgcggtcgcctgaacgtgctcgcgaacatcgtcggcaag
ccgtactcgcagatcttctccgagttcgagggcaacctgaacccggccgctgcgcacggc
tccggcgacgtgaagtaccacctcggcgccgagggcacctacatccagatgttcggcgac
aacgacatcaaggtctcgctcaccgcgaacccctcgcacctcgaggcggtcaacccggtg
ctcgagggcctcgtccgcgccaagcaggacatcctcgacaagggtgaggacggcttcacc
gtcctgccgctgctgctgcacggcgacgctgcgttcgccggccagggcgtcgtcgcggag
accctgaacctcgcgctgctgcgcggctaccgcaccggcggcaccgtgcacatcgtcgtc
aacaaccaggtcggcttcaccaccgcgcccgagcactcgcgttcgtccgagtactgcacc
gacgtggcgaagatgatcggcgcgccgatcttccacgtcaacggcgacgatcccgaggcc
tgcgtgtgggtcgcgaagctcgccgtggacttccgcgagaagttccacaaggacgtcgtc
atcgacatgatctgctaccgccgccgcggtcacaacgagggcgacgacccgtcgatgacc
cagccggcgatgtacgacgtgatcgacaccaagcgcagcgtccgcaagagctacaccgag
gccctgatcggccgcggcgacatctcgctcaaggaagcggaagacgccctgcgcgactac
cagggacagctcgaacgggtcttcaacgaggtccgcgaactcgagaagtacccgccggag
ccgtcggagtcggtcgagctcgaccagaccccgccgaagcgtctcgacacctccgtcgac
cggtcggtgctcgagcggatcggcgatgccttcgccgaggcgcccgagggcttcagcgtc
cacccgcgcgtcaagccggtgctcgagaagcgtcgcgagatgtcgcgcaacggcaagatc
gactgggcgttcgccgagctgctcgcgttcggttcgctggccgagcagggtgccctggtg
cgcctggccggtcaggactcgcgtcgcggcacgttcacgcagcgtcactcggtcatcatc
gaccgcaagacgggcgacgagtacagcccgctcgccacgctggccaaccaggccggcaac
ggcggccgcttcatggtctacgactcggcgctgaccgagttcgcgggcctgggcttcgag
tacggctactcggtgggcaaccccgacgcgctcgtgctgtgggaggcgcagttcggcgac
ttcgtcaacggcgcgcagtccatcatcgacgagttcatctcgtccggtgaggccaagtgg
ggtcagctctccgacgtcgtgctgctgctgccgcacggccacgagggccagggtcccgac
cacacctcgggccgtatcgagcgctggctgcagctgtgcgccgagggctcgatgacggtc
gcggttccgtccaccccggcgagctacttccacctgctgcgtcgtcatcacctcgacggc
atccgccgcccgctggtggtattcacgccgaagtcgatgctgcgcaacaaggccgcggtc
agcaacgtcgaggacttcacgcagggcaagttccgttcgctgctcgaagaggtcccctac
gaggagggcacggccgaccgcacgaaggccacccgcgtgctgctcacctccggcaagatc
tactgggagctgctggcgaagaagcagaaggaaggtcgtgacgacgtcgcgatcgtgcgc
atcgagcagctgtacccggtgccgcgtcgccgcatcgccgagacgctcgagcagtacccg
aacgccaccgagttcttctgggtgcaggaggagccggcgaaccagggtgcctggccgttc
ctcggcctcgcgctgccggaactgctgcccgagaagctcagcggcatcaagcgcgtgtcg
cgtcgtgcgatgtcggcaccgtcgtccggctcgagcaaggtccatgctgtcgagcagcag
gagatcatcgagaaggccttcggtcgctag
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