Rhodococcus sp. PD04: U9J23_12775
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Entry
U9J23_12775 CDS
T11027
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
rhpd Rhodococcus sp. PD04
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhpd03051
]
U9J23_12775 (dop)
Enzymes [BR:
rhpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
U9J23_12775 (dop)
Proteasome [BR:
rhpd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
U9J23_12775 (dop)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WSE20605
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All DBs
Position
2760860..2762353
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AA seq
497 aa
AA seq
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MQRIIGIEVEYGISSPNEPSANPILTSTQAVLAYAAAEGVPRARRTRWDYEVESPLRDAR
GFDLGRFNGPAPVIDADEVGAANMILTNGARLYVDHAHPEYSAPEVADPLDAVIWDKAGE
RVMEAAARHASSVPGAPRLQLYKNNVDGKGASYGTHENYLMDRETPFSAVVAGLTPFFVS
RQVITGSGRVGIGQSGDEPGFQLSQRADYIEVEVGLETTLKRGIINTRDEPHADADKYRR
LHVIIGDANLAEMSTYLKVGTTALVLDLIEAGIDLSDLQLARPVTAVHHISHDPSLRKTV
ALADGRELTGLALQRIYHERVAKFHDGTEDKRILDILDKWAMVLDLLERDPMECADLLDW
PAKLRLLEGFRNREGLSWSAPRLHMVDLQYSDVRLDKGLYNRLVARGSMQRLVSEQQVLD
AVHTPPSDTRAYFRGECLRRFGADIAAASWDSVIFDLGRESLVRIPTLEPLRGSRAHVGE
LLETAQSAAELVDQLTH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggatcatcggtatcgaggtcgagtacgggatctcctcacccaacgagccatcg
gcgaacccgatcctgacctccacgcaggcggtgctggcctacgcggccgccgagggggtg
ccgcgtgcccggcgcacccgctgggactacgaggtcgaatcgcccctgcgcgacgcgcgg
ggcttcgatctgggccggttcaacggcccggccccggtcatcgacgccgacgaggtcggt
gccgcgaacatgatcctcaccaacggggcgcgcctgtacgtcgaccacgcccaccccgaa
tactccgccccggaggtcgccgaccccctcgacgcggtgatctgggacaaggccggggag
cgggtgatggaggccgccgcccggcacgcctcgagtgtgcccggcgcaccgcgactgcag
ctgtacaagaacaacgtcgacggcaagggcgcctcctacggcacccacgagaactacctg
atggaccgcgagaccccgttctccgcggtggtcgcgggcctgaccccgttcttcgtctcc
cggcaggtcatcaccggctccgggcgggtggggatcggccagtccggtgacgagcccggt
ttccagttgtcgcagcgcgccgactacatcgaggtcgaggtcggtctcgagaccaccctc
aagcgcggcatcatcaacacccgcgacgagccgcacgccgacgccgacaagtaccggcgg
ctgcacgtgatcatcggcgacgcgaatctggcggagatgtccacctacctcaaggtcggc
accaccgcgctcgtgctcgacctgatcgaggccggcatcgacctgtcggatctgcagctc
gcccgcccggtcaccgcggtgcaccacatcagccacgacccgtcgctgcgcaagaccgtc
gcgctcgccgacggccgcgagctgacgggcctggcattgcagcggatctaccacgaacgg
gtcgcgaagttccacgacggcaccgaggacaagcggatcctcgacatcctcgacaagtgg
gcgatggtgctcgacctgctcgaacgcgacccgatggaatgcgccgacctgctggactgg
cccgcgaagctgcggctgctcgagggtttccgcaaccgtgaggggctctcgtggtcggcg
ccgcgcctgcacatggtcgacctgcagtactcggatgtgcgcctggacaagggcctgtac
aaccggctcgtcgcccgcggatcgatgcagcggctggtgtccgagcagcaggtgctcgac
gcggtgcacaccccgccgtcggacacccgcgcctacttccgcggcgagtgcctgcgccgc
ttcggtgccgatatcgcggcggcgagctgggattcggtgatcttcgatctcggtcgcgag
tcgctggtgcgcatcccgacgctcgagccgctgcgcggcagccgcgcgcatgtcggggag
ctgctcgagacggcgcagtcggcggcggaactggtcgatcagctcacccactga
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