Rhodococcus sp. p52: IM25_17000
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Entry
IM25_17000 CDS
T05434
Name
(GenBank) UDP-N-acetylmuramyl peptide synthase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00300
Lysine biosynthesis
rhq00550
Peptidoglycan biosynthesis
rhq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IM25_17000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IM25_17000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhq01011
]
IM25_17000
Enzymes [BR:
rhq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IM25_17000
Peptidoglycan biosynthesis and degradation proteins [BR:
rhq01011
]
Precursor biosynthesis
Amino acid ligase
IM25_17000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AOD24462
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Position
complement(3679684..3681186)
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AA seq
500 aa
AA seq
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MRRIQVRDVAEHLRDVLRSGPADRHDHVITGISDDSRTVRPGDLYVALPGHHAHGLDFEA
EAATHGAVAVLSDRPSRLLPAFVVDRPRDVVGPLASWILGHPSHDLQVHGITGTNGKTSA
TYLLDTALAATGVVTGMIGGVVVRGPAGTRPATRTTPEASVVHRTLAEFRDQGVQAVTLE
VSSHGISQGRVDGVRFRTVAFTNLGPDHLDFHHTMEQYFAAKAALFTADRTQTAVVNIDD
EYGRRLAASVDVPLWTHSTCDARADVYADSIRCDLHGTCFTVHTPAGSAPVRLSLLGPHQ
VANALTALTSVAAVDGDVLQAAAGLETLAGVPGRLERVDAGEGVLALVDYMHNTSGQREL
LPFLRSLAPERRLVLVISATGERYPGKRFPLGHTAATYADVVVVTDDSPLSEDPRVLRDA
VAEGAFAARSARVVVEADRRRAFDIAIAHTGPGDVVVVAGRGCEPRLVSGDTVQVFDDRD
ELRRALHRAHRRSTSRVPRC
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atccggcggatccaggtccgcgacgtcgccgagcacctccgcgatgtcctgcgatccgga
ccagcggaccggcacgaccatgtgatcaccggcatcagcgacgattcccggacggtgcgc
cccggcgatctgtacgtagcgctacccggacaccacgcccacggcctggacttcgaagcc
gaagccgccacccatggcgcggtcgcggtgctcagcgaccggccgtcgcgcctgctgccc
gccttcgtggtcgatcgaccgcgcgacgtggtcggcccgttggcgtcgtggatcctcggg
catccctcccacgacctgcaggtccacggcatcaccggcaccaacggcaagacgagcgcg
acctatctcctcgacaccgcactcgcggccaccggcgtggtgaccggcatgatcggcggg
gtcgtcgtgcgcggtccggccggcacacgacccgcgacccgcaccactcccgaggcctcg
gtcgtgcaccgcacgcttgccgagttccgtgaccagggcgtgcaggcggtgacgctcgag
gtgtcctcgcacggcatcagtcagggccgcgtcgacggtgtgcggttccgtaccgtcgcc
ttcaccaatctcgggcccgaccacctcgacttccaccacacgatggagcagtacttcgcc
gccaaggcggcactgttcaccgccgaccgcacgcagacggccgtggtgaacatcgacgac
gagtacgggcgacgtctggcggcctccgtcgacgtgccgctgtggacgcactcgacctgc
gatgcccgcgccgacgtgtacgcggactcgatccggtgcgatctccacggcacctgcttc
accgtgcacacgccggccgggagtgcgccggtgcgactgtcgctgctcggaccacaccag
gtggccaatgcgctgacggcgctcacctcggtggccgccgtcgacggcgacgtcctgcag
gccgcagcgggtctggagaccctcgcgggtgtgcccggccggctcgaacgcgtcgacgcc
ggtgagggtgttctcgcgctcgtggactacatgcacaacacgtccgggcaacgcgaactg
ttgcccttcctccggtcgctcgcccccgagcggcgactggtcctcgtgatcagcgcgacc
ggagaacgctatcccggcaagcgatttccgctcgggcacaccgccgcgacctacgccgac
gtggtggtcgtgaccgacgacagtcccctctcggaggacccgcgtgtgctcagggatgcg
gtcgccgaaggtgccttcgcagcgcgcagcgcccgcgtcgtcgtcgaggccgaccgacgt
cgcgcgttcgacatcgccatcgcccacaccggtcccggagacgtcgtcgtcgtggccgga
cggggatgcgagccacgcctggtctccggggacacggtgcaggtgttcgacgaccgggac
gaactgcggcgcgcactgcaccgcgcgcaccggaggtccacctcgcgcgtgccccgctgc
tga
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