Rhodococcus sp. p52: IM25_20175
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Entry
IM25_20175 CDS
T05434
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00860
Porphyrin metabolism
rhq01100
Metabolic pathways
rhq01240
Biosynthesis of cofactors
rhq03030
DNA replication
Module
rhq_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IM25_20175
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM25_20175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhq03032
]
IM25_20175
Enzymes [BR:
rhq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
IM25_20175
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
IM25_20175
DNA replication proteins [BR:
rhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
IM25_20175
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
AOD23607
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Position
complement(4375285..4376445)
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AA seq
386 aa
AA seq
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MTTVVVEADGGSRGNPGPAGYGAVVFDADHRTVLAERQASIGRATNNVAEYKGLIAGLTA
AAELGADEVHVRMDSKLVVEQMSGRWQVKHADMIPLAAQARELAGRFRTVDFTWIPRAEN
AYADRLANAAMDAAAEALLDVASDTVTRPVAPSNAGAENVATPPAVPVPDPAVPPSPGWT
GAVGSPTRLLLLRHGQTSLSVERRYSGRGNPELTELGRDQAVAAARRLGARGGITAVLAS
PLGRARETAAAAADALDLPVTVHDGLIETDFGDWEGLTFAEAARRDPELHRRWLGDTSVR
PPNGESFDEVAKRIASVRDDLLTDYVGSTVLVVSHVTPIKTFLQMALESGPSLLYRLHLD
LASLSIAEFYADGGSSVRLVNDTSHL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacggtcgtcgtcgaagcggacggtggttctcgcgggaatcccggaccggccggt
tacggtgccgtggtcttcgatgccgaccatcggaccgtcctcgccgaacgccaggcgagc
atcgggcgcgcgacgaacaacgtcgccgagtacaagggtctgatcgccggtctcacggcc
gccgccgagctcggcgccgacgaggtgcacgtccgcatggattccaagctcgtcgtcgag
cagatgagcggacggtggcaggtcaagcatgccgacatgatcccgctggccgcgcaggcg
cgggagctcgccggccggttccgcaccgtcgacttcacgtggatcccgcgtgcggagaac
gcctacgccgaccggctggccaacgccgcgatggacgcggccgccgaagcgctgctggac
gtcgcgtccgacactgtgacgcgtcccgtggcgccgtcgaatgcgggggccgagaacgtc
gccaccccgccggccgtgcctgtgcccgatccggcagtgccgccttcacccggctggacc
ggtgcggtcgggtcaccgacccgtcttctgctgctgcgtcacgggcagacctcgctgtcg
gtcgagcgtcgctactcggggcggggcaacccggagctgaccgaactcggtcgcgaccag
gcggtcgccgcggccaggcgactcggtgcccgcggcgggatcaccgccgtgctggcgtca
ccgctggggcgagcgcgggagacggccgctgcggccgccgacgccctcgatctcccggtg
acggtgcacgacgggctgatcgagacggatttcggcgactgggagggtctcaccttcgcc
gaggccgcgcgtcgcgatcccgaactgcaccgccgctggctcggcgacacctccgtgcga
cccccgaacggcgagagcttcgacgaggtcgccaagcggatcgcctcggtgcgcgacgac
ctgctgaccgactacgtcggctcgaccgtgctggtcgtctcgcacgtcacgcccatcaag
acgttcctgcagatggcgctcgagtccggcccgtcgctgctgtaccgcctgcacctggat
ctcgcgtcgctcagcatcgccgagttctacgcggacggcggctcgtccgtgcggctcgtc
aacgacacctcgcacctgtga
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