Rhizobium sp. 11515TR: CKA34_18605
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Entry
CKA34_18605 CDS
T06097
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKA34_18605 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhr03400
]
CKA34_18605 (nth)
Enzymes [BR:
rhr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKA34_18605 (nth)
DNA repair and recombination proteins [BR:
rhr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKA34_18605 (nth)
Prokaryotic type
CKA34_18605 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASW08232
LinkDB
All DBs
Position
3788633..3789436
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AA seq
267 aa
AA seq
DB search
MGLEYRSLMANPKIKSSAQTAKKSNVTAGRKPAGKSLYSKADLEEIFRRFSIQRPEPKGE
LEHVNPFTLVVAVALSAQATDAGVNKATRALFAVADTPQKMLDLGEERIREYIKTIGLYR
NKAKNVVALSEKLITDFGGEVPRTREELITLPGVGRKTANVVLSMAFGQATMAVDTHIFR
IANRLLLAPGKTPDEVEQRLMKIIPDQYLYHAHHWLILHGRYVCKARKPECERCVIADLC
RSPEKTCDIPAPLVELPPQIIGAEAAG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ataggacttgagtataggtcgcttatggcaaatccaaagatcaaatccagcgcccaaacc
gcgaaaaagtcaaatgtgaccgcaggccgcaagccggcgggaaagagcctttattccaaa
gcggacctggaagagatcttccggcgcttctccatccagcggccggaaccgaagggcgag
ctcgagcacgtcaatccttttacgctggtcgttgccgtggcgctttcagcgcaggcgacc
gacgccggcgtcaacaaggcgacgcgtgccctctttgccgttgccgataccccgcagaag
atgctcgatctcggcgaggaacgcatccgcgaatatatcaagacgatcggcctttaccgc
aacaaggcgaaaaacgtcgtggctctgtcggaaaagctgatcaccgattttggcggcgag
gtgccgcgcacccgcgaagaattgatcaccctgcccggcgtcggccgcaagacggcgaac
gtcgtgctttccatggctttcggccaggcgacgatggccgtcgacacgcatatcttccgc
atcgccaaccggctgctattggctccgggcaagacgcccgacgaagtcgagcagcggctg
atgaagatcattcccgaccagtatctctaccacgcacatcattggctgatcctgcatggt
cgctatgtatgcaaggcgcgcaagcccgaatgcgaacgctgcgtaatcgcagacctctgt
cgctcgccggaaaaaacctgtgacatccctgctcctctggtcgagcttccgccccagatc
attggagcggaagcggcaggctaa
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