Rhodococcus sp. RDE2: RDE2_41070
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Entry
RDE2_41070 CDS
T11469
Name
(GenBank) aminotransferase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rhrd Rhodococcus sp. RDE2
Pathway
rhrd00270
Cysteine and methionine metabolism
rhrd00450
Selenocompound metabolism
rhrd01100
Metabolic pathways
rhrd01110
Biosynthesis of secondary metabolites
rhrd01230
Biosynthesis of amino acids
Module
rhrd_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
rhrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RDE2_41070
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RDE2_41070
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhrd01007
]
RDE2_41070
Enzymes [BR:
rhrd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
RDE2_41070
Amino acid related enzymes [BR:
rhrd01007
]
Aminotransferase (transaminase)
Class II
RDE2_41070
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Motif
Pfam:
Aminotran_1_2
DUF5071
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
BDB62313
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Position
complement(4445931..4447130)
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AA seq
399 aa
AA seq
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MTSDERLSVGGPGVPGFDDLDFDALSARSGAKWARAATDGLAPAWVADMDFPVAPPIAHT
LHELVERSDLGYPDWFHGTPLREEFAQRMRTRYGWEPDPGAVREQTDLIQALQLVLHLST
TRGDAVAIQTPNYPPFLASLRRMGLQQIDFPFVDRGDGWVLDFDAFEPLVARRRPRVLVL
VNPHNPTGRVLTREELERIADLAERFDMLVVSDEIHAELIYEPHRHIPFASLGPETAART
VTLTSASKAFNLAGMRCAVVHYGSGTLLERRDAEPFDLYGTVSVPGVIATLAAWREGDAW
QRDLLQVLARNRRRVDEVLRERIPSLRHHLPQGTYLTWLNTGPLGIDDPVSVVRDRGRVL
ADGGVRFGSGARNFLRINFATSGPILERILDGVTDALGA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgacgagcgcctctcggtcggcggtcctggggtgcccgggttcgacgacctc
gacttcgacgccctgtcggcgcggtccggtgccaagtgggcacgggcggccaccgacggg
ctggcccccgcatgggtcgccgacatggacttcccggtcgcaccgccgatcgcgcatacg
ctgcacgagctggtcgagcgtagcgatctcggttatcccgactggttccacggcacgccg
ctgcgtgaggagttcgcgcaacgcatgcgcacgcgttacggatgggaacccgatcccggt
gccgtccgcgagcagacggatctcatccaggcattgcagctcgtgctgcacctgagcacc
acgcgcggcgatgcggtggcgatccagacaccgaactacccgccgttcctggcgtcgctg
cgacggatgggtctgcagcagatcgactttccgttcgtcgaccggggcgacgggtgggtg
ctcgacttcgatgcgttcgagccgttggtggcacggcgtcgtccgcgggtactggtgctc
gtcaacccgcacaaccccaccgggcgggtgctcacgcgtgaggaactcgagcggatcgcc
gatctcgccgaacggttcgacatgcttgtcgtcagcgacgagatccatgccgagctgatc
tacgagccgcaccggcacatcccgttcgcgtcgctcggaccggagaccgctgcccgcacg
gtgacgctcacttccgccagcaaggcgttcaacctcgcagggatgcggtgcgcggtggtg
cactacggctcaggaacactgctcgagcgccgggacgcggagccgttcgacctgtacggg
acggtgtcggttccgggagtgatcgccacgctcgccgcgtggcgcgagggcgacgcgtgg
cagcgcgacctgctgcaggtcctcgcccggaatcgtcggcgggtggacgaggttctgcgc
gaacggatcccgtccctgcggcaccatctgccgcagggcacctacctgacatggttgaac
accggacccctcggcatcgatgatccggtgtcggtcgtccgcgatcggggacgtgtcctc
gccgacggcggggtgcggttcgggtcgggggcacgcaacttcctgcgcatcaacttcgcg
acgtcggggccgatcctcgagcggatcctcgacggggtcaccgacgcgctcggcgcctga
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