Rhodococcoides fascians PBTS 2: A3Q41_00973
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Entry
A3Q41_00973 CDS
T05030
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhs
Rhodococcoides fascians PBTS 2
Pathway
rhs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3Q41_00973 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_00973 (nth)
Enzymes [BR:
rhs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3Q41_00973 (nth)
DNA repair and recombination proteins [BR:
rhs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3Q41_00973 (nth)
Prokaryotic type
A3Q41_00973 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AMY22290
UniProt:
A0A143QGW6
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All DBs
Position
complement(988566..989252)
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AA seq
228 aa
AA seq
DB search
MNRTLGVAFPHVYCELDFTTPLELAVATILSAQCTDKRVNMVTPALFVRYRTARDYAEAD
RTELEEFIRTTGFYRNKANSLIGLGQKLLENFDGEVPASLKDLVTLPGIGRKTANVVLGN
AFDVPGITVDTHFGRLVRRWQWTEEEDPVKVEHAVGALIERKEWTVLSHRVIFHGRRVCH
SRTPACGVCVLAKDCPSFGLGPTDPATAAALVRGPETDHLLALAGIVS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaacgctcggggtcgcgtttccgcacgtctactgcgaactcgacttcaccacg
cccctcgaactcgccgtcgcgaccatcctgtccgcgcagtgcaccgacaagcgcgtcaac
atggtgactccggccctgttcgtgagataccgcacagcccgcgactacgccgaagccgac
cgaaccgaactcgaagagttcatccgaaccaccggcttctaccgcaacaaggccaactcg
ctgatcgggctgggtcagaagttgctcgagaacttcgacggcgaagtccccgcatcgttg
aaggatctggtgacgttgcccggcatcggccgcaagacggccaacgtcgtgctcggcaac
gcgttcgacgttcccggcatcaccgtcgacacccacttcggtcggctggtgcggcgctgg
cagtggaccgaagaagaggaccccgtcaaggtggagcacgccgtcggcgcgctgatcgag
cggaaagagtggaccgtgctctcccatcgcgtcatctttcacggtcgacgcgtctgccac
tcccgcacgccggcgtgcggggtgtgcgtcctcgccaaggactgcccgtcgttcggcctc
ggcccgaccgatccggcgaccgctgccgccctggtgagaggtcccgagaccgatcatctg
ctcgctctcgccggaatcgtgtcgtga
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