Rhodococcus sp. SGAir0479: E7742_21125
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Entry
E7742_21125 CDS
T11403
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhsq Rhodococcus sp. SGAir0479
Pathway
rhsq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E7742_21125 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhsq03400
]
E7742_21125 (nth)
Enzymes [BR:
rhsq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E7742_21125 (nth)
DNA repair and recombination proteins [BR:
rhsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E7742_21125 (nth)
Prokaryotic type
E7742_21125 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QCQ94082
LinkDB
All DBs
Position
4563987..4564667
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AA seq
226 aa
AA seq
DB search
MNRRLKEAFPHVYCELDFTTPLELTVATILSAQCTDVRVNQVTPALFARYRDARDYAEAD
RTELEEYIRTTGFYRNKANSLIGLGQALLERYDGEVPDKLKDLVTLPGIGRKTANVVLGN
AFGVPGITVDTHFGRLVRRWQWTEETDPVKVEHAVGALIERKEWTDLSHRVIFHGRRVCH
ARKPACGVCVLAKDCPSYGTGPTDKVAAAKLVKGPETEHLLELAGM
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccggttgaaggaggcgtttccgcacgtctactgcgagctcgacttcaccacg
ccgctcgagctgacggtcgcgacgatcctgtcggcgcagtgcacggatgtccgcgtcaac
caggtgactcccgcgctgttcgcgcgttatcgcgacgcccgcgactacgccgaggcggac
cggacggagctcgaggagtacatccgcaccaccgggttctatcgcaacaaggcgaactcg
ctcatcggtctgggccaggcgctcctcgagcgttacgacggtgaagttccggacaagctg
aaggacctcgtgacacttcccggtatcggtcgcaagactgcgaacgtcgtcctcggaaac
gcgttcggcgtgccgggaatcacagtggacacgcacttcggtcgcctcgtccggcggtgg
cagtggaccgaggagacggacccggtcaaggtcgagcacgcggtcggagcgctcatcgag
cgcaaggagtggaccgacctgtcccaccgcgtgatcttccacggccgccgggtgtgccat
gcgcgcaagccggcgtgcggggtctgtgtgctcgcgaaggactgcccgtcgtacggcacc
ggcccgaccgacaaggtggcggcggccaagctggtgaagggcccggagaccgagcatctt
ctcgagttggcgggtatgtga
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