Rhodococcus sp. PBTS 1: A3Q40_03472
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Entry
A3Q40_03472 CDS
T05182
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3Q40_03472 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhu03400
]
A3Q40_03472 (nth)
Enzymes [BR:
rhu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3Q40_03472 (nth)
DNA repair and recombination proteins [BR:
rhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3Q40_03472 (nth)
Prokaryotic type
A3Q40_03472 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AMY20832
UniProt:
A0A143QED8
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All DBs
Position
complement(3703070..3703807)
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AA seq
245 aa
AA seq
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MGIRSETPLALTRRARRMYRQLGEVFPHVYCELDFTTPLELAVATILSAQCTDKRVNETT
PALFARYRSARDYAEADRTELEEYIRSTGFYRNKATSLIGLGRELLERFDGEVPPRLKDL
VTLPGIGRKTANVVLGNAFDVPGITVDTHFGRLVRRWEWTAEEDPVKVEHAVGALIPKKD
WTVLSHRVIFHGRRVCHARTPACGVCPLAPLCPANGTGPTDARKAAALVRGPETDHILAL
AGVER
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgggtattcggtcggagactccgctggcgttgacgcgccgcgcccggcggatgtaccga
cagctgggcgaggtgttcccgcatgtctactgtgagctggacttcaccacgccgctcgag
ctcgcggtggcgacgatcctgtcggcgcagtgcacggacaagcgggtgaacgagacgacg
cccgcgttgttcgcccggtaccgctcggcgcgggactacgcggaggcggaccggacggaa
ctcgaggagtacatccgctccaccggcttctaccggaacaaggcgacgtcgctgatcggc
ctgggtcgggagctgctcgagcggttcgacggcgaggtcccgccccgcctgaaggacctg
gtcaccctgccggggatcggtcgcaagacggccaacgtcgtgctcggcaacgcgttcgac
gtcccggggatcaccgtcgacacgcacttcggtcggctcgtgcgccgatgggaatggacc
gccgaggaagatccggtcaaggtcgagcacgcggtgggtgcgttgattccgaagaaggac
tggacggtgctctcgcaccgcgtgatcttccacggccgccgggtctgtcatgcccggacg
cccgcgtgcggcgtctgtccgctcgctccgctgtgtcccgccaacggcaccgggcccacg
gacgcgcgcaaggccgccgccctcgtgcgcggtcccgagaccgaccacattctcgcgttg
gccggtgtggagcggtga
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