Rhizobium sp. S41: BA939_04985
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Entry
BA939_04985 CDS
T05451
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rhv
Rhizobium sp. S41
Pathway
rhv00300
Lysine biosynthesis
rhv00550
Peptidoglycan biosynthesis
rhv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BA939_04985
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BA939_04985
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhv01011
]
BA939_04985
Enzymes [BR:
rhv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BA939_04985
Peptidoglycan biosynthesis and degradation proteins [BR:
rhv01011
]
Precursor biosynthesis
Amino acid ligase
BA939_04985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RibD_C
Motif
Other DBs
NCBI-ProteinID:
ANV23353
LinkDB
All DBs
Position
1:complement(997212..998681)
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AA seq
489 aa
AA seq
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MNLRDISGNAFPELKELLLSEIGAIEIGGITADSRKAAPGSLFVAVSGTKADGATYVKDA
VAKGTVAVVSGHAVEAEVPVLVVTDPRLYLSLAASRFYGKQPETMVAVTGTAGKTSVASF
VRQIWAFAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASS
HGLDQRRLDGVRLSAAGFTNLGRDHMDYHPTVEDYMAAKMRLFDTLMEKGAPAVIFADDP
WSDKAVHAAREAGLDVRTVGRNGQYLALKRVEHFRHKQMIEVHHDGVIHEVDIPLAGDFQ
VANALVAAGLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALEN
VLTSVRPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSE
VMAAAPDALEIGDRSEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRTA
LAALEGSKI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcgagatatatccggaaatgcgtttccggaattgaaagaattgctcctgtct
gagatcggggcgatcgaaatcggggggatcaccgcagacagccgcaaggctgcgccgggc
agcctgttcgttgcggtttctggcaccaaggctgatggtgcgacctatgtaaaggatgcg
gttgccaagggtaccgttgccgttgtttctgggcacgcggtggaagccgaagtgccggtt
ctggtcgtgaccgacccacgcctttatctctcccttgccgcctcccgcttttacggaaaa
caaccggaaaccatggtcgccgtcactggcaccgcgggaaagacctcggttgcctccttc
gtgcggcagatctgggctttcgccggccatgccgcagcccagatcggcacaaccggtgtc
atcgctcccggccgggaggattatggcgcgctgacgacgcccgatccggtgacgctgcat
gcgcttctggccgagcttgcgagcgagggcgtcacccacgcggcgatggaagcttccagc
cacggtctcgaccagcgccgcctcgatggcgtgcgcctttctgccgccggctttaccaat
cttggccgcgaccatatggattaccatccgaccgtcgaggattacatggccgcgaagatg
cggcttttcgatacgctgatggaaaaaggcgctcccgccgtgatcttcgccgacgatcct
tggtcggacaaggcggttcatgcggcgcgcgaagcgggtctcgatgtccgcaccgtcgga
cggaacgggcaatatctcgctttgaagcgcgttgagcatttccgccacaagcagatgatc
gaagtgcatcatgacggcgtcatccacgaagtcgatatcccgctcgcgggtgatttccag
gtggccaatgcgcttgttgccgccggtcttgccatgtcgacgggtgttcccgccgcaacg
gcgctcaaggcgctcgaaaagcttgtcggcgctgccggccgtctcgaattagtgggacaa
acgaaaaacggcgcgcttgcctatgtggattacgcccacaagcccgatgcgctggaaaac
gtgctgacctcggtccggcccttcacctccggccgcatcatcaccgttttcggctgcggc
ggcgaccgcgacaagggcaaacgcccgatcatgggcgaggtcgcgacccgtctttccgac
atcgtcatcgtcacggacgacaatccgcgctcggaagacgcggcgacgatccgctccgag
gtgatggcggcggcgcccgacgctctggaaattggcgacaggtccgaggcgatccgccat
gcggtatcgatgctgtcgcatggcgatacgctgatcgtcgcgggcaaagggcatgaagaa
gggcagatcgttggctccgtgacactgcctttttccgatcatgaacaggtgcgcactgca
ctggcagcgctggaaggatcgaaaatttga
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