Rhizobium sp. N731: AMK02_CH03003
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Entry
AMK02_CH03003 CDS
T04809
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx00270
Cysteine and methionine metabolism
rhx00450
Selenocompound metabolism
rhx00670
One carbon pool by folate
rhx01100
Metabolic pathways
rhx01110
Biosynthesis of secondary metabolites
rhx01230
Biosynthesis of amino acids
rhx04980
Cobalamin transport and metabolism
rhx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AMK02_CH03003 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AMK02_CH03003 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMK02_CH03003 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMK02_CH03003 (metH)
04980 Cobalamin transport and metabolism
AMK02_CH03003 (metH)
Enzymes [BR:
rhx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
AMK02_CH03003 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ANK86559
LinkDB
All DBs
Position
complement(2999848..3003621)
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AA seq
1257 aa
AA seq
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MFDTLFGPETGKRDGSEVFAALRKAASERILVLDGAMGTQIQGLGYDEDQFRGTRFIGCA
CHQKGNNDLLILTQPDAIEEIHYKYAKAGADILETNTFSSTRIAQADYQMEGAVYDLNKE
GAEIVRRAALRAEREDGRRRFVAGAIGPTNRTASISPDVNNPGFRAVTFDDLREAYGEQI
DGLIDGGADIILIETIFDTLNAKAAIFACEERFEAKGVRLPVMISGTITDLSGRTLSGQT
PSAFWNSVRHANPFTIGLNCALGANAMRPHLQELSGVADTFICAYPNAGLPNEFGQYDET
PELMAAQIDSFAREGLVNIVGGCCGSTPEHIRAIAETVAKYKPRPIPEHRPFMSLSGLEP
FELTKDIPFVNVGERTNVTGSAKFRKLITNADYTAALDVARDQVENGAQVIDINMDEGLI
DSEKAMVEFLNLIAAEPDIARVPVMIDSSKFSIIESGLKRVQGKPIVNSISLKEGEENFL
TQARLLRNYGAAVVVMAFDETGQADSYERKVEICERAYTLLTEKIGFPPEDIIFDPNIFA
VATGIEEHNNYGVDFIEATRTIRERMPLVHISGGVSNLSFSFRGNEPVREAMHAVFLYHA
IQAGMDMGIVNAGQLAVYDNIDPELREACEDVVLNRRADSTERLLEVAERFRGAGAKEGR
VQDLSWREWSVEKRLEHALVNGITEYIEADTEEARRRAARPLHVIEGPLMAGMNVVGDLF
GSGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRLNGGDDRQSAGKILMATVKGDVHDIGK
NIVGVVLACNNYEIVDLGVMVPATKILETAIAEKVDVIGLSGLITPSLDEMVHVASEMER
QGFEIPLLIGGATTSRVHTAVKIHPGYNKGQAVYVTDASRAVGVVSALLSPETRQGYVDD
IRAEYAKVAAAHARSEAEKVRLPLSRARENAHKIDWSAYKPTKPEFFGTRVFEDYDLAEL
ARYIDWTPFFQTWELRGRFPAILEDEKQGEAARALWADAQAMLKKIIDEKWFRPRAVIGF
WPAGAVGDDIRLFTDESRGQELATFYTLRQQLSKRDGRANVALSDFVAPVTSGVQDYVGG
FVVTAGIEEIAIAERFERSNDDYSSILVKALADRFAEAFAERMHEQVRREYWGYARDEHL
SNEDLIGEAYAGIRPAPGYPAQPDHTEKATLFKLLDAEKAAGVKLTESYAMWPGSSVSGI
YIGHPDSYYFGVAKVERDQVEDYAKRKGMEVSEVERWLGPVLNYVPRKADEEIEDAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatactctctttggtccggaaacgggcaagcgtgacggcagtgaagttttcgca
gcgctgcgcaaagccgccagcgagcgcatcctcgtcctcgacggcgccatgggcacgcag
atccagggcctcggctatgacgaagaccagtttcgcggcacccgcttcatcggctgcgcc
tgccaccagaaaggcaataacgaccttctgatcctgacccagccggatgcgatcgaagag
atccattacaaatacgccaaagccggcgccgatattctcgagaccaacaccttctcctcg
acccgcatcgcccaggccgattaccagatggaaggcgccgtctacgacctcaacaaggaa
ggtgccgaaatcgtccgccgcgcggctctgcgcgccgagcgcgaggacggccgccgccgt
ttcgtcgccggcgccatcggcccgaccaaccgcaccgcctcgatctcgcccgacgtcaac
aatcccggcttccgcgccgtcaccttcgacgatctcagggaagcctatggcgagcagatc
gacgggctgatcgacggcggtgccgacatcatcctcatcgagacgatcttcgacacgctg
aacgccaaggcggcgattttcgcctgcgaggagcgtttcgaggccaagggcgtgcgcctg
ccggtgatgatctccggcacgattaccgacctttccggccgtacgctctccggccagacg
ccgtcggccttctggaattcggtgcgccacgccaatcccttcacgatcggcctcaactgc
gcgctcggggcgaacgcgatgcgcccgcacctgcaggaactgtcgggcgtcgccgacacc
ttcatctgcgcctatccgaatgccggcctgccgaacgaattcggccagtatgacgaaacg
ccggagctgatggcggcccagatcgacagttttgcccgtgaaggtctggtcaacatcgtc
ggcggctgctgcggctcgacgcccgaacatatcagggcgatcgccgagaccgtcgccaag
tacaagccgcggccaatcccggaacatcgccccttcatgtcgttgtctggcctcgaacct
ttcgagctgaccaaggacattcccttcgtcaatgtcggcgagcgcaccaacgtcaccggc
tcggcgaagttccgcaagctgatcaccaatgccgactacacggcagcgctcgatgtggcg
cgcgaccaggtcgagaacggcgcgcaggtgatcgacatcaacatggacgagggcctgatc
gattccgagaaggcgatggtcgagttcctcaatctgatcgccgccgagcccgacatcgcc
cgcgtgcctgtgatgatcgactcgtcgaaattctcgatcatcgaatccggcctgaagcgg
gtgcagggcaagccgatcgtcaactcgatctcgctgaaggaaggcgaggagaatttcctc
acccaggcgaggctcctgcgcaattacggtgcggccgtcgtcgtcatggccttcgacgaa
acgggacaggccgacagctatgagcgcaaggtggaaatctgcgagcgtgcctacacgctg
ctgaccgaaaagatcgggttcccgcccgaggatattatcttcgaccccaatattttcgcg
gtcgcgaccggcatcgaagagcacaataattacggtgtcgacttcatcgaggcgacgcgg
acgatccgtgagcgcatgccgctcgtgcatatctccggcggcgtctccaacctgtccttc
tcgttccgcggcaacgagccggtgcgcgaggcgatgcacgcggtgttcctctaccacgcc
atccaggcgggtatggacatgggcatcgtcaatgccggccagctggccgtctacgacaac
atcgatcccgagctgcgcgaagcctgcgaggacgtggtgctgaaccgccgtgccgacagc
accgaacggctgctcgaagtggccgaacgtttccgtggcgccggggcaaaggagggccgt
gtccaggacctctcctggcgcgaatggagcgtcgagaagcgtctcgagcacgcgctggtc
aacggcatcaccgaatatatcgaggccgatacggaagaggcgcgccggcgggccgcccgg
ccgttgcacgtcatcgaagggccgctgatggccggcatgaacgtcgtcggtgatctcttc
ggctcgggcaagatgttcctgccgcaggtcgttaaatccgcccgcgtcatgaagcaggcc
gttgccgtccttctcccctatatggaggaggagaagcgcctcaatggcggcgacgatcgg
cagtcggcgggcaagatcctgatggcgacggtcaagggcgacgtgcacgatatcggcaag
aacatcgtcggcgtcgtgctcgcctgcaacaattacgagatcgtcgacctcggcgtcatg
gtgccggcgacgaagatccttgaaacggcgatcgccgaaaaggtcgacgtcataggtctt
tccggtctgatcacgccgtcgctcgacgagatggtgcatgttgcgtccgagatggaacgg
cagggcttcgagattccgctgctgatcggcggcgccacgaccagccgcgtgcatacggct
gtgaagatccatcccggctacaacaagggccaggcggtctatgtcaccgatgcgagccgc
gccgtcggcgtcgtctcggcgctgctctcgccggagacgcggcagggctatgtcgacgat
ataagagccgaatacgccaaggtggcggccgcgcatgcccgcagtgaagcggagaaggtg
cgtttgccactgtcgcgggctcgcgagaacgcgcataagatcgactggtcggcctacaag
ccgaccaagcctgagttcttcggcacacgggtgttcgaggattacgatctggccgaactc
gcgagatacatcgactggacgccgttcttccagacctgggaattgcgcggtcgtttcccc
gccattctcgaagacgagaagcagggcgaggcggcgcgtgcgctctgggccgatgcgcag
gccatgctgaagaagatcatcgatgagaagtggttccgcccgcgcgccgtcatcggcttc
tggccggcaggcgccgtcggcgacgacatccgcctgttcaccgacgaaagccgcggccag
gagcttgccaccttctacacgcttcgccagcagctgtcgaagcgggacgggcgggcgaat
gtggcgctttcggacttcgtcgcgccagtcacaagcggcgtgcaggactatgtcggcggc
ttcgtggtaacggccggtatcgaggaaatcgccatcgccgaacgcttcgagcggtcgaac
gacgactactcctcgatcctcgtcaaggcgctggccgaccgctttgcggaagcctttgct
gagcgcatgcatgagcaggtgcggcgcgaatattggggttatgcaagggatgagcacctc
agcaacgaggatctcatcggcgaagcctatgccggcatccgtccggcgcccggttatccc
gcccagcccgaccacacggaaaaggcaacgctcttcaagttgctcgatgcagaaaaagcc
gccggcgtgaagctgacggagagctatgcgatgtggcccggctcatctgtatccggcatc
tatatcggccatcccgattcctattatttcggcgtcgccaaggtggagcgggaccaggtg
gaggactatgccaagcgcaagggcatggaggtttccgaggtcgaacgctggctcgggccg
gtgctgaactacgtgccgcgcaaggcagacgaggagattgaggacgcggcatag
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