Rhodoplanes sp. Z2-YC6860: RHPLAN_04990
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Entry
RHPLAN_04990 CDS
T04290
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz00020
Citrate cycle (TCA cycle)
rhz00270
Cysteine and methionine metabolism
rhz00620
Pyruvate metabolism
rhz00630
Glyoxylate and dicarboxylate metabolism
rhz00680
Methane metabolism
rhz00710
Carbon fixation by Calvin cycle
rhz00720
Other carbon fixation pathways
rhz01100
Metabolic pathways
rhz01110
Biosynthesis of secondary metabolites
rhz01120
Microbial metabolism in diverse environments
rhz01200
Carbon metabolism
Module
rhz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHPLAN_04990
00620 Pyruvate metabolism
RHPLAN_04990
00630 Glyoxylate and dicarboxylate metabolism
RHPLAN_04990
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RHPLAN_04990
00720 Other carbon fixation pathways
RHPLAN_04990
00680 Methane metabolism
RHPLAN_04990
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RHPLAN_04990
Enzymes [BR:
rhz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RHPLAN_04990
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Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
AMN38964
UniProt:
A0A140GVD5
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Position
549952..550920
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AA seq
322 aa
AA seq
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MARNKIALIGAGQIGGTLAHLIGLKQLGDVVLFDIAEGIPQGKSLDLVQSSPVEGFDSKM
VGTNAYEAMEGADVCIVTAGVPRKPGMSRDDLLGINLKVMDQVGAGLKKYAPNAFVICIT
NPLDAMVWALQKASGLPRNMVVGMAGVLDSARLRYFLADEFNVSVEDVSAFVLGGHGDTM
VPMARYSTVAGIPLPDLIRMGWTTQARVEEIFNRTRNGGAEIVNLLKTGSAFYAPASSAI
AMAESYLLDKKRVLPCAAWLNGEYGIKNLYVGVPVVIGAKGVERIVELDLTGSERSEFDK
SANAVKALVDACQKIAPDLGKK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaacaagattgcgttgatcggcgcaggccaaattggcggcacgctcgcgcac
ctcatcggactgaagcagcttggcgacgtcgtgctgttcgacatcgccgaaggcattccc
cagggcaaatcgctcgatctcgtccagtcgtcgccggtcgaaggcttcgactccaagatg
gtaggcaccaacgcctatgaggcgatggaaggcgccgacgtctgcatcgtcaccgccggt
gtgccgcgcaagccgggcatgagccgcgacgatcttctcggcatcaatctcaaggtgatg
gaccaggtcggcgccggtttgaaaaagtacgcgcccaacgccttcgtcatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaaggcctcgggcctgccgcgcaacatg
gtggtcggcatggccggcgtgctcgactcggcgcggctgcgttacttcctggccgacgag
ttcaacgtgtcggtggaagacgtctcggccttcgtgctcggcggtcacggcgacaccatg
gtgccgatggcgcggtattcgacggtcgccggcattccgctgcccgatctcattcgcatg
ggctggaccactcaggcccgcgtcgaggaaatcttcaaccgcacccgcaacggcggcgcc
gagatcgtcaatctgctcaagaccggctcggcgttctacgcgccggcttcgtcggccatc
gcgatggcggagagctacctgctcgacaagaagcgcgtgctgccctgcgccgcgtggctc
aacggcgagtacggcatcaagaatctctacgtcggcgtgccggtggtgatcggcgccaag
ggcgtcgagcgcatcgtcgagctcgatctcaccggttcggagcgcagcgagttcgataag
tcggccaatgccgtgaaggcgctggtcgatgcctgccagaagatcgcgccggatctcggc
aagaagtaa
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