Rhodoplanes sp. Z2-YC6860: RHPLAN_05020
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Entry
RHPLAN_05020 CDS
T04290
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rhz
Rhodoplanes sp. Z2-YC6860
Pathway
rhz00020
Citrate cycle (TCA cycle)
rhz00785
Lipoic acid metabolism
rhz01100
Metabolic pathways
rhz01110
Biosynthesis of secondary metabolites
rhz01120
Microbial metabolism in diverse environments
rhz01200
Carbon metabolism
rhz01210
2-Oxocarboxylic acid metabolism
Module
rhz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHPLAN_05020
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RHPLAN_05020
Enzymes [BR:
rhz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RHPLAN_05020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AMN38967
UniProt:
A0A140GVD7
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All DBs
Position
553257..556211
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AA seq
984 aa
AA seq
DB search
MSRQDANAAFARTSFLYGGNAAYVEQLQSRYEANPASVDAEWRAFFESLKDEREDVRKNA
SGPSWQRPITHANGELVAALTGDWAEVEKTIGDKVKAKAQSKGVEISAADVQQATRDSIR
ALMLIRAYRIRGHFHAKLDPLGLEPEKSEEELDPRSYGFTEADFDRKIFIDKVLGLEFAN
LREILAIVRRTYCQTLGVEFMHISDPAQKAWLQERIEGRDKEINFTREGKRAILNKLVEA
EGFEKFCDIKFTGTKRFGLDGGESMIPALEQIIKRGGALGVKEIVIGMAHRGRLNVLAQV
MGKPHRAIFHEFKGGSSSPDSVEGSGDVKYHLGASSDREFDGNQVHLSLTANPSHLEIVN
PVVLGKTRAKQDQHGASREDRTMVMPLLISGDAAFAGQGVIAECFGLSGLRGHRTGGSVH
FIVNNQIGFTTYPRFSRSSPYPSDVAKMIEAPIFHANGDDPEAVVYAAKVATEFRQKFQV
PVVVDMFCYRRFGHNEGDEPAFTQPVMYKAIRSHPSTLDIYAKRLVGENVVTDGEVEKMR
ADWRARLDVEQEASQSYKANHADWLDGRWSGMKAAASVSDDPRRGNTGVAVETLKDIGSK
ITKVPEGFHVHRTIQRFLDARQKAIETGQGIDWATAEALAFCSLLLDGHPVRLSGQDSER
GTFSSRHSVLIDQENEDRYTPFNEIGQKQARYEVINSMLSEEAVLGFEYGYSLAEPNALT
LWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLERYLQM
CAEDNMQVANCSTPSNYFHILRRQLKREIRKPLILMTPKSLLRHKRAVSRLDEMATGTTF
HRVLWDDAQMLPDEKIKLVEDSKIRRVVMCTGKVYYDLYEEREKRGIDDIYLLRVEQLYP
FPTKALVTELARFKQAEFVWCQEEPRNMGAWHFVEHYIEWVLNQIEAKQRRPRYATRPAS
AATAVGQMSKHQAQLKQLLDEALG
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgccaagatgcgaatgcggcgttcgcccgcacgtcatttctctatggcggcaat
gccgcctatgtcgaacaactccaatcccgctatgaagccaatccggcgtcggtcgacgcc
gaatggcgcgccttcttcgagagtctgaaggacgagcgcgaggacgttcgcaagaacgcc
agcggtccctcgtggcagcggccgatcacccacgccaacggcgaactggtcgcggctctc
accggcgactgggccgaggtcgagaagaccatcggcgacaaggtcaaggccaaggcgcag
agcaagggcgtcgagatttcggccgccgacgtgcagcaggcgacgcgcgattcgatccgc
gcgctcatgctgatccgcgcctaccgcatccgcggccacttccacgccaagctcgatccg
ctcggccttgagcccgagaagagcgaagaggagctcgatccgcgctcctacgggttcacc
gaagccgacttcgaccgcaagatcttcatcgacaaggtgctcggcctggaattcgccaac
ctgcgcgaaatccttgccatcgtgcgccgcacttactgccagacgctaggcgtcgagttc
atgcacatctccgatcccgcgcagaaggcgtggctgcaggagcgcatcgagggccgcgac
aaggagatcaacttcacccgcgagggcaagcgcgcgatcctcaacaagctggtcgaagct
gaaggcttcgagaagttctgcgatatcaagttcaccggcaccaagcgcttcggcctcgac
ggcggcgagtcgatgatcccggcgctggagcagatcatcaagcgcggcggcgcgcttggc
gtcaaagagatcgtcatcggcatggcccatcgcggccggctcaacgtgctggcccaggtg
atgggcaagccgcaccgcgcgatcttccatgagttcaagggcggctcgtcgtcaccggac
agtgtcgaaggctcgggcgacgtgaagtatcacctcggcgcctcgtcggaccgtgagttc
gacggcaaccaggtgcatctgtcgctcaccgcgaacccgtcgcatctcgagatcgtcaat
ccggtggtgctgggcaagacccgcgccaagcaggatcagcacggcgcgagccgcgaagac
cgcaccatggtgatgccgctgctcatctccggcgacgccgcgttcgcgggccagggcgtg
atcgccgaatgcttcggcctctcgggcctgcgcggccatcgcaccggcggttcggtgcat
ttcatcgtcaacaaccagatcggcttcacgacctatccgcgcttctcgcgttcgtcgccg
tatccgtccgacgtcgccaagatgatcgaggcgccgatcttccacgccaacggcgacgat
cccgaagctgtggtctacgccgccaaggtcgcgaccgaattccggcagaagttccaggtg
ccggtcgtggtcgacatgttctgctaccgccgcttcggccacaacgagggcgacgagccg
gcattcacgcagccagtgatgtacaaggcaatccgctcgcatccttcgacgctggacatc
tacgccaagcgcctcgtcggcgagaatgtcgtcaccgacggcgaagtcgagaagatgcgc
gccgactggcgcgcccggctcgacgtcgagcaggaggcgagccagagctacaaggccaac
cacgccgactggctggacggtcgctggtccgggatgaaggccgccgcgtccgtcagcgac
gatccgcgccgtggcaacaccggcgtcgccgtcgagaccttgaaggacatcggcagcaag
atcaccaaggtgccggagggcttccacgtccaccgcaccattcagcgcttcctcgacgcg
cgccagaaggcgatcgaaaccgggcagggcatcgactgggccaccgccgaggcgctggcc
ttctgctcgctgctgctcgacggccatccggtgcggctgtccggacaggactccgagcgc
ggcaccttctcgtcgcggcactccgtcctgatcgaccaggagaatgaggaccgctacacg
ccgttcaacgagatcggccagaagcaggcgcgctacgaggtcatcaactcgatgctctcg
gaggaggccgtgctcggcttcgaatacggctattcgctcgccgagcccaatgcgctcacc
ctgtgggaggcgcagttcggcgatttcgccaacggcgcccaggtggtgttcgatcagttc
atctcgtcgggcgaacgcaagtggctgcgcatgtcgggcctcgtctgcctgctgccgcac
ggctatgaaggccaggggcccgagcactcctccgcgcgcctcgagcgctatctgcagatg
tgcgccgaggacaacatgcaggtcgccaactgctcgacgccgtcgaactacttccacatc
ctgcgccgtcagctgaagcgcgagatcagaaagccactgatcctcatgacgccgaagtcg
ctgctccgtcacaagcgggcggtatcgcggctcgatgagatggccaccggcaccacgttc
caccgcgtgctgtgggacgatgcgcaaatgctgccggacgagaagatcaagctggtcgag
gacagcaagatccgccgcgtcgtgatgtgcaccggcaaggtctattacgatctctacgag
gagcgcgagaagcgcggcattgacgacatctatctgctgcgcgtcgaacagctctatccg
ttcccgaccaaggcgctggtcaccgagctcgcccgcttcaagcaggccgagttcgtctgg
tgccaggaggagccgcgcaacatgggcgcgtggcacttcgtcgagcactacatcgaatgg
gtgctgaaccagatcgaggccaagcagaggcggccgcgctacgcgacgcgtccggcttcg
gccgcgaccgcggtcggccagatgtcgaagcatcaggcgcagttgaagcagctcctcgac
gaggcgctgggataa
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