Rugositalea oryzae: RHPLAN_47670
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Entry
RHPLAN_47670 CDS
T04290
Name
(GenBank) TraR/DksA family transcriptional regulator
KO
K06204
RNA polymerase-binding transcription factor
Organism
rhz
Rugositalea oryzae
Brite
KEGG Orthology (KO) [BR:
rhz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
RHPLAN_47670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhz03000
]
RHPLAN_47670
03021 Transcription machinery [BR:
rhz03021
]
RHPLAN_47670
03009 Ribosome biogenesis [BR:
rhz03009
]
RHPLAN_47670
Transcription factors [BR:
rhz03000
]
Prokaryotic type
Other transcription factors
Others
RHPLAN_47670
Transcription machinery [BR:
rhz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
RHPLAN_47670
Ribosome biogenesis [BR:
rhz03009
]
Prokaryotic type
rRNA transcription factors
RHPLAN_47670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA-like_N
zf-dskA_traR
DUF8445
DUF3090
DUF7837
Motif
Other DBs
NCBI-ProteinID:
AMN43191
LinkDB
All DBs
Position
complement(5475943..5476260)
Genome browser
AA seq
105 aa
AA seq
DB search
MNQHQGVTETLKARLAELRQHLVKVDRSLHKPLSADSGDQAIELENQDALAEIERSEIKE
ARQIEAALKRIADGKYGTCAKCGAPIDPKRLKALPTAATCISCSA
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaccaaggcgtcacagagacactgaaggcgcgcctcgccgagctacggcag
catctggtgaaggtcgatcgctcattgcacaaaccgctgtccgccgactctggggaccag
gccatcgagctggaaaatcaggacgcgctcgcagaaatcgaacggtctgagatcaaagaa
gcccgtcagatcgaggccgctctgaagcggatagccgatggcaagtacggaacgtgcgcc
aagtgcggggcgccgatcgacccgaaacgcctgaaggcgcttccaacggcggcaacatgc
atttcctgttcggcttga
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integrated database retrieval system
