Rhodoplanes sp. Z2-YC6860: RHPLAN_58170 Help Entry RHPLAN_58170      CDS       T04290                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rhz  Rhodoplanes sp. Z2-YC6860 Pathway rhz03030   DNA replication rhz03410   Base excision repair rhz03420   Nucleotide excision repair rhz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rhz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     RHPLAN_58170    03410 Base excision repair     RHPLAN_58170    03420 Nucleotide excision repair     RHPLAN_58170    03430 Mismatch repair     RHPLAN_58170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rhz03032]     RHPLAN_58170    03400 DNA repair and recombination proteins [BR:rhz03400]     RHPLAN_58170 Enzymes [BR:rhz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      RHPLAN_58170 DNA replication proteins [BR:rhz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      RHPLAN_58170 DNA repair and recombination proteins [BR:rhz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      RHPLAN_58170    NER (nucleotide excision repair)     GGR (global genome repair) factors      RHPLAN_58170    MMR (mismatch excision repair)     DNA ligase      RHPLAN_58170   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       RHPLAN_58170 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 PTCB-BRCT Nlig-Ia DUF5315 Motif Other DBs NCBI-ProteinID:  AMN44231 UniProt:  A0A127F3L1 LinkDB All DBs Position complement(6705585..6707702) Genome browser AA seq 705 aa AA seqDB search MKAAKPHRDSKLAVAEMTANQAKREHARLEAEIKTHDEAYYQKDAPLVPDAEYDALRQRY NAIEERFPDLRTLDSLSRKVGAAPARGFAKVRHAVPMLSLENAFSDTDVTDFVGRIRRFL NLKEDAELAFTAEPKIDGLSMSLRYEGGELKVAATRGDGAEGEDVTANIKTLKDVPHKLK GKRVPEVCEVRGEVYMTKADFLALNKRQAETGGQIFANPRNSAAGSLRQKDSSITASRPL RFFAYAWGEMSEMPADKQSSMIKWLGSAGFHVNPIWKLCHSAEELLAFQHEVGLKRATLE YDIDGVVYKTDRLDWQERLGFVSRTPRWAIAHKFAAERAATVVRDIEIQVGRTGALTPVA KLEPVTVGGVVVQNATLHNQDEIERLGVRIGDTVTIQRAGDVIPQVVEVVQDKPRGKKAY KFPTECPCPLKTEVVREVIAGGEAGARAHCTGEFACPFQRTQHLMHFVSRRAFDIEGLGE KQIELFYEQGWVKEPADIFTLQERDKKINLKDVEGYGEISVRNLYQSIEARRDISLERFI YALGIRHVGETTAIALARGYGSWQAFHDAALKVVDKDEEAVAEMDALDQIGDTVIEAIGE YFGESHNRKLVDRLVGQVSIKEAERPKTDTAVAGKTVVFTGSLEKMTRDEAKAMAERLGA KVSGSVSKKTDYVVAGPGAGSKLAEAQKHGVQVLSEDDWFRLIGR NT seq 2118 nt NT seq  +upstreamnt  +downstreamnt atgaaagccgccaagccgcaccgcgattccaagctcgccgtcgccgagatgaccgccaac caggcgaagcgcgagcacgcgcgcctcgaagccgagatcaagacgcacgacgaggcctac taccagaaggacgcgccgctggttcccgacgccgaatacgacgcgctgcggcaacgctac aacgcgatcgaggaacgcttcccggacctgcgcacgctggacagcctgtcgcgcaaggtc ggcgccgcgccggcgcgcggcttcgccaaagtccggcacgcagtgccgatgctgtcgttg gagaacgccttcagcgacaccgacgtcaccgatttcgtcggccgcatccggcgcttcctc aacctgaaggaagacgccgagctcgccttcacggcagagcccaagatcgacgggctgtcg atgtcgctccgctacgaaggcggcgagctgaaggtggcggcgacccgcggcgacggcgcc gagggcgaggacgtcaccgccaacatcaagacgctgaaggacgtgccgcacaagcttaag ggaaagcgcgtgccggaggtctgcgaggtgcgcggcgaggtctacatgaccaaggccgac ttcctggcgctgaacaagcggcaggccgagaccggcgggcagatcttcgccaatccgcgc aactcggcggctggctcgctgcggcagaaggactcgagcatcacggcgtcgcggccgctg cgcttcttcgcttacgcgtggggcgagatgagcgagatgccggccgacaagcagtcgagc atgatcaaatggctcggcagcgccggcttccacgtcaatccgatctggaagctatgtcac tctgccgaggagctgctggcgttccaacatgaggtcgggctgaagcgcgccacgctcgaa tacgacatcgacggcgtggtctacaaaaccgatcgcttggattggcaggagcggctgggc ttcgtgtcgcgcacgccgcgctgggcgatcgcgcacaaattcgcagccgagcgggccgct acggtggtgcgcgacatcgagattcaggtcggccgtaccggtgcgctgacgccggtggcc aagctcgagccggtgacggtcggcggcgtcgtggtgcagaacgcgacgcttcacaatcag gacgagatcgagcggctgggcgtgcgcatcggcgacaccgtgacgatccagcgcgccggc gacgtgatcccgcaggtggtcgaggtcgtccaggacaagccgcgcggcaagaaagcctac aaattcccgaccgaatgcccgtgcccgttgaagaccgaggtggtgcgcgaggtgattgcc ggcggcgaggcgggcgcgcgcgcgcattgcaccggcgagttcgcctgcccgttccagcgc acccagcatttgatgcatttcgtgtcgcgccgcgccttcgatatcgaagggctcggcgag aagcagatcgagctgttctacgaacagggttgggtgaaggaacccgccgatatttttacg ctccaggagcgcgacaagaagatcaatctgaaggacgtcgagggctacggcgagatttcg gtccgcaatctctatcagtcgatcgaagcgcgccgcgacatttcactggagcgcttcatc tatgcgctgggcatccgccatgtcggcgagacgacggcgattgcgctcgcccgtggctac ggctcatggcaggcgtttcatgatgcggcgctgaaggtcgtcgacaaggacgaggaagcg gtggccgagatggacgcgctcgatcagatcggcgacacggtgatcgaggcgatcggcgag tatttcggcgagagccacaaccggaagctcgtcgatcggctggtcgggcaggtctcgatc aaggaggccgaaaggccaaagacggatacggcggtggccggcaagaccgtggtgttcacc ggctcgctggaaaagatgacccgcgacgaggccaaggccatggccgagcgtctgggcgcg aaggtgtcgggctcggtgtcgaagaagaccgactacgtggttgcgggtccgggcgccggc tccaagctcgccgaggcgcagaagcacggggtgcaagtgttgagcgaggatgattggttc aggctgattgggcgatag

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