Rhodococcus sp. ZPP: HYG77_12620
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Entry
HYG77_12620 CDS
T11458
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rhzp Rhodococcus sp. ZPP
Pathway
rhzp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhzp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYG77_12620 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhzp03400
]
HYG77_12620 (nth)
Enzymes [BR:
rhzp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYG77_12620 (nth)
DNA repair and recombination proteins [BR:
rhzp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYG77_12620 (nth)
Prokaryotic type
HYG77_12620 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QTJ66361
LinkDB
All DBs
Position
complement(2673016..2673801)
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AA seq
261 aa
AA seq
DB search
MHVTPSDGSSLRGRARSRAANQEESRLGLVRRARRMNRRLAEAFPHVYCELDFTTPLELA
VATILSAQCTDVRVNMTTPALFARYPDAKAYAEAERTELEEYIRSTGFYRNKATSLIGLG
QALLEHHDGEVPNTLKELVKLPGIGRKTANVILGNAFDVPGITVDTHFGRLVRRWQWTDE
EDPVKVEHAVGAIIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPVDP
DVAAELVRGPETEHLLRLAGR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgtgacccccagtgacggctccagtctgcgtggacgcgcccgttcccgggccgcg
aatcaggaggaatcccggctcggcctcgtgcgacgcgcccggaggatgaaccgccgcctc
gcggaggctttcccacacgtctattgcgagctcgacttcaccactccactggaactcgcg
gtcgcgaccatcctctccgcacagtgcaccgatgtccgggtcaacatgacgacgccggcg
ttgttcgcccgctacccggatgcgaaggcgtatgcggaagccgaacgcacggagctcgag
gagtacatccggtccaccggtttctaccgcaacaaggcgacgtcgctgatcggcctcggg
caggctctcctcgagcatcacgacggagaggttccgaataccctgaaggaactggtgaag
cttcccggtatcggacgcaagaccgccaacgtgattctgggcaacgccttcgatgtcccg
ggcatcaccgtcgacactcatttcggtcggctggtccggcgctggcaatggaccgacgag
gaggatcccgtcaaggtcgagcacgcggtcggggcaatcatcgaacgcaaggaatggact
ctgttgtcccaccgggtgattttccacggtcggcgcgtctgccatgcccggaagccggca
tgtggcgtgtgtgttctggccaaggactgtccgtcgtacggtctgggcccggtcgacccc
gacgtcgctgccgagttggtgcgcggaccggagaccgagcatctgcttcgtctggccggc
cggtga
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