Rathayibacter iranicus: C7V51_05070 Help Entry C7V51_05070       CDS       T05878                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ria  Rathayibacter iranicus Pathway ria03030   DNA replication ria03410   Base excision repair ria03420   Nucleotide excision repair ria03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ria00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C7V51_05070    03410 Base excision repair     C7V51_05070    03420 Nucleotide excision repair     C7V51_05070    03430 Mismatch repair     C7V51_05070  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ria03032]     C7V51_05070    03400 DNA repair and recombination proteins [BR:ria03400]     C7V51_05070 Enzymes [BR:ria01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C7V51_05070 DNA replication proteins [BR:ria03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C7V51_05070 DNA repair and recombination proteins [BR:ria03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C7V51_05070    NER (nucleotide excision repair)     GGR (global genome repair) factors      C7V51_05070    MMR (mismatch excision repair)     DNA ligase      C7V51_05070   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C7V51_05070 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT Nlig-Ia HHH_5 HHH PTCB-BRCT Motif Other DBs NCBI-ProteinID:  AZZ55327 UniProt:  A0AAD1AD80 LinkDB All DBs Position complement(1092954..1095308) Genome browser AA seq 784 aa AA seqDB search MSDPIVDPARRVEELRARIRAASDAYYAADSSPLADAEYDALVRELAALEAEHPDLVADD SPTQTVGGIVGAGLAPIDHAERMLSLDNVFSPDELREWCDKTVASADRPISWLTELKIDG LAISLHYEHGRLVTAATRGDGRIGEDVTVNALRISGIPERLAGEGHPALVEVRGEVFIPV AAFTELNALQERLRDEAVEEARARWSARPAATRGVFEEEKARTSALRRFPTFANPRNAAS GGLRQQLDKKAGLDLRAGEARVSSLALYVHGIGAWPDPPVGTQSAVYGLLSAWGLPVSAH NRVSESVEEVLAFVEQYGRDRHGVEHEIDGVVVKVDELELHGELGATSRAPRWAIAYKYP PEEVHTKLLDIVVSVGRTGRATPFAQMTKVRVAGSEVRQATLHNADVVKAKGVLIGDTVV LRKAGDVIPEVLGPVVELRDGSEREFVMPTQCPECGTTLAPAKAGDVDLRCPNAESCPAQ VRGRVEHIGSRGALDIEALGEVSAAALTQPLVPADPPLRTEAGLFELTVADVFPIEVVVR DSETGLQKLDANGEPKVVTPFKRKRQPAKDGAFDPAAGAFAGDAVSVPSTNALRLIENIE RAKTKELWRLLVSLSIRHVGPVAGRALAGYFGSLDAIRSASRDELAAVDGVGGIIADAVI AWVEVDWHVEIVERWAAAGVRFATPGHPGPGAADAAGGVLAGLTVVATGSLEGYSREEAQ EAILAAGGKAGSSVSKKTDYVAAGPGAGSKLGKAEALGLRIITAAEFHLLVTEGPAAIAL PSDE NT seq 2355 nt NT seq  +upstreamnt  +downstreamnt atgagcgatccgatcgtcgatcctgctcgccgggtcgaggagctgcgggcgcgtatccgt gcggcgagcgacgcgtactacgcggccgactcctccccgctcgccgacgccgagtacgac gctctcgtgcgcgaactcgccgccctcgaagccgagcatcccgaccttgtcgcagacgac tcgcccacgcagacggtcggtggcatcgtcggcgcagggctcgctcccatcgatcacgcc gagcggatgctgtcgctcgacaacgtgttctcgcccgacgagctgcgcgagtggtgtgac aagacggtcgcgtcggctgaccgccccatctcttggctgaccgaactcaagatcgacggc ctggccatctcgctgcactacgagcacggtcgcctcgtgaccgccgcgacccgcggcgat ggccggatcggcgaggacgtcacggtgaacgcgctccggatttcgggcatccccgagcgt ttggcgggcgaggggcatcccgcgctcgtcgaggtccgtggcgaggtgttcatcccggtc gccgccttcaccgaactcaacgccctgcaagagcggctgcgcgacgaggcggtcgaggag gcgcgggcgcgttggtctgcccgccccgccgccactcgcggcgtcttcgaggaggagaaa gcccgcacgagcgcgctgcgccgctttccgactttcgccaatccgcgtaacgcggcgagc ggcgggctccggcagcagctcgacaagaaggccggcctcgatctgcgcgccggcgaggcc cgagtctcctcgctcgcgctctacgtccacggcatcggcgcctggcccgacccgcccgtg ggcacgcagtccgcggtgtacggcctgctctccgcctggggcttgccggtcagcgcccac aaccgcgtctcggagtcggtcgaggaggtgctcgcgttcgtcgagcagtacgggcgtgac cgccacggtgtcgagcacgagatcgacggagtcgtcgtcaaggtggacgagctcgagctg cacggcgagctcggtgccaccagtcgggccccgcgctgggcgattgcctacaagtacccg cccgaggaggtgcacacgaagctcctcgacatcgtcgtgagcgtggggcgcacgggccga gccactccgttcgcgcagatgacgaaggtcagggtcgccgggtcggaggtgcgccaggcg acgctgcacaatgctgacgtggtcaaagccaagggcgtgctgatcggcgacacggtcgtg ctgcgcaaggcgggtgacgtgatccccgaggtgcttggccccgtggtggagctgcgagac ggcagcgagcgggagttcgtgatgccgacccaatgccccgagtgcggcaccaccctcgcg cccgcgaaggcgggcgatgtcgatcttcgctgccctaacgcggagtcgtgcccggcccag gtgcgcgggcgcgtcgagcacatcggcagccgtggtgctctcgacatcgaggcgctcggc gaggtgagcgcggcggcgctcacgcagccgctcgtcccggcagatccgccgttacgcacc gaggctggcctcttcgagctcacggtggccgatgtcttcccgatcgaggtcgtcgtccgc gactccgagactgggctgcagaagctcgacgcgaacggcgagccgaaggtcgtcaccccg ttcaagcgcaagcgccagccggcgaaggacggcgcgttcgatccggcggctggcgccttc gcgggagatgccgtctcggtgccctccaccaacgccctgcggctgatcgagaacatcgag cgcgcgaagaccaaagagctgtggcgcctgctggtctcgctcagcatccggcacgtcggt ccggtcgcgggccgagcgctggcgggctacttcggttcgctcgacgcgatccgctcggcg agccgcgacgagctcgccgcggtcgacggcgtgggcgggatcatcgcggacgcggtgatc gcgtgggtcgaggtcgactggcacgtcgagatcgtcgagcgttgggctgcggccggcgtg cgattcgccacgccggggcaccctggtcccggggccgcggacgccgcgggcggagtgctc gccgggctcacggtcgtcgcgacgggcagcctcgagggctactcccgcgaggaggcccag gaggcgatcctcgccgccggcggcaaggctggttcgagcgtctcgaagaagaccgactac gtcgccgccggtcccggcgcgggcagcaagctcggcaaggccgaggcgctggggctacgg atcatcaccgcggccgagttccacctgctggtgaccgaggggcccgcggcaatcgcgctt ccctccgacgaatga

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