Rathayibacter iranicus: C7V51_09785
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Entry
C7V51_09785 CDS
T05878
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ria
Rathayibacter iranicus
Pathway
ria00300
Lysine biosynthesis
ria00550
Peptidoglycan biosynthesis
ria01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C7V51_09785
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C7V51_09785
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ria01011
]
C7V51_09785
Enzymes [BR:
ria01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C7V51_09785
Peptidoglycan biosynthesis and degradation proteins [BR:
ria01011
]
Precursor biosynthesis
Amino acid ligase
C7V51_09785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF4267
DUF6257
Motif
Other DBs
NCBI-ProteinID:
AZZ56140
UniProt:
A0AAD1AFE3
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Position
2090271..2091815
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AA seq
514 aa
AA seq
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MLRPRHAPSVPLVALARTLEVESDDALAAAVTGVTLIASDVEPGDLFVALPGAHRHGADF
IEQAVSRGAVAVLTDLFGESAARTTGLPVLVVSEPRSRLGAIAAAVYGTAERSPVLFGVT
GTNGKTSTVHMLEGILRQLGVVPGLSSTAERHIGDTSVTSGLTTPEATEFHALVARMEEE
GVGAAAIEVSAQALTRHRVDGVVFDVAGFTNLSHDHLDDYGDMDTYFGEKAQLFQSDRAR
RAVVSLDSPYGERICTAAGVPVTTIASLPGVDADWRVTVLTQEFGRTRFRMENREGRAIT
TSVPIIGAHMAANAALAIAMLIEAGWPIGEIRAALHRDGGVDASLPGRIERVSGERGPTV
YVDFGHSADAFHRTLEAVRQVTPGRVIMVFGADGDRDALKRPAMAEAAVGGSDILVVTDH
HPRFENPVAIRRTLIDAALAARPDAQVHEVDDPKRAIRVAVSLAGEGDAILWAGPGHQNY
RDVLGVRTPYSARAEARAALREAGWADEAVSASA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgctccgaccccgccacgctccgtccgttcctctcgtcgcactcgcccgtaccctcgag
gtcgagagcgacgacgcgctggccgcggcggtcaccggagtcacgctgattgcctccgac
gtcgaacccggagaccttttcgtcgccctaccaggcgcacatcgccacggcgcggacttc
attgagcaggcagtatcccggggcgcggtcgcggtactcaccgacctgttcggcgagagt
gccgcgcgcacgaccggcctgcccgtcctggtggtgtcggagccgcgctcccgcctcggt
gccatcgccgccgccgtgtacggcaccgccgagcgctccccggtgctcttcggagtcacc
ggaaccaacggaaaaacctcgaccgtgcacatgctcgagggcatcctgcgccagctcggc
gtggttcccgggctgagctccacggccgaacggcacatcggtgacacgtcggtgaccagc
ggcctgaccactcccgaggccaccgagttccacgctctcgtcgcccgcatggaggaggag
ggagtcggtgccgcggccatcgaggtcagtgcccaggccctcacccgacaccgtgtcgac
ggcgtcgtgttcgatgtcgccggattcaccaacctcagccacgaccacctcgacgactac
ggggacatggatacctacttcggcgagaaggcgcagttgttccagtccgatcgagcccgc
cgtgccgtcgtctcactcgactccccctacggcgagcggatctgcaccgcggccggagtg
ccggtgacgaccatcgcctccctcccgggcgtcgacgcggactggcgagtgaccgtgctc
acgcaggaatttggccgcacgcgctttcggatggaaaaccgcgagggacgcgccattacg
acgtcggtgccgatcatcggcgcacacatggctgccaacgctgcgctcgcgatagcgatg
ctgatcgaggcgggctggccgatcggcgagatccgggccgcgctgcaccgcgacggcgga
gtcgacgcgtcccttcccggccgcatcgagcgcgtgtcgggcgagcgtgggccgaccgtc
tacgtggacttcggccatagcgccgacgcgttccaccgcacgctcgaggcggtccgacag
gtcacgcccggccgcgtgatcatggtgttcggcgccgacggcgaccgcgacgccctcaag
cgccccgcgatggccgaggcggcggtgggaggaagcgacatcctggtcgtcaccgaccac
catccccgcttcgagaatcccgtcgccatccggcgcacccttatcgacgccgcgctcgcg
gcgcgccccgatgcgcaggtgcacgaggtcgacgatcccaagcgtgccatccgggttgcg
gtttctcttgcgggcgaaggcgacgccattctttgggcgggtccaggccaccagaactac
cgcgatgtcctcggggtgcgcaccccttactccgcgcgagcggaggcgcgcgctgcgctc
cgcgaggccggctgggcggacgaggcggtgtcagcgagcgcatga
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