Rickettsia sp. MEAM1 (Bemisia tabaci): BA173_02275
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Entry
BA173_02275 CDS
T05695
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ric
Rickettsia sp. MEAM1 (Bemisia tabaci)
Pathway
ric03030
DNA replication
ric03410
Base excision repair
ric03420
Nucleotide excision repair
ric03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ric00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BA173_02275
03410 Base excision repair
BA173_02275
03420 Nucleotide excision repair
BA173_02275
03430 Mismatch repair
BA173_02275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ric03032
]
BA173_02275
03400 DNA repair and recombination proteins [BR:
ric03400
]
BA173_02275
Enzymes [BR:
ric01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BA173_02275
DNA replication proteins [BR:
ric03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BA173_02275
DNA repair and recombination proteins [BR:
ric03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BA173_02275
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA173_02275
MMR (mismatch excision repair)
DNA ligase
BA173_02275
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BA173_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
5_3_exonuc
UBAP-1_UBA2
Motif
Other DBs
NCBI-ProteinID:
ASX27720
LinkDB
All DBs
Position
complement(453524..455605)
Genome browser
AA seq
693 aa
AA seq
DB search
MNKKYQNIDLISKEEAKKLLIELADKIAEYNHAYYIEDKPLVSDAEYDQLFNINLKLEQK
FPHLTLENSPSKKVGAKVENKFAKVTHQVPMLSLSNVFDEEDVKDFLDRIKSFLRLDQFS
PIFCEPKIDGLSFAATYKNGILTTGATRGDGYIGEDITANIKTIKDFPHKINNAPELLEV
RGEIYIEKNDFTSLNQEQEQQGKDKFANPRNAAAGSLRQLDPSVTAKRPLKYFVYAIGSA
KEELANSQDQLLAKFKELGFNVNEIGKLANSEEEIFSFYEYLKTNRGNLPYEIDGVVYKL
NDFALQDRMGFIARSPRFATAHKFPAIIGQTKLLSITVQVGRTGTLTPVAELEPIEIGGV
IVSRATLHNYQEIARKDVRVGDYVFLQRAGDVIPQITGVDLAKRSADVTTFDPPLFCPSC
NSKLHYVPEDIIIRCDNGLNCPAQNYERIRHFVSKNAMDIEGLGRKQVEFLIDKGLISNP
YDIFFLKEKNEASLTKLENMDGWGKKSVENLFNNIEKSKNVSLPRFIYTLGIRHIGEQNA
KLLAREFGSYENFIAQMELLKENDPEIYQKLNNLDGIGDKMLVDIIDFFDVKENIELIKN
LSEVLNIEDYKETREQSSLTGKIVVFTGSMPTLSRAEAKATAEKLGAKVAASVSSNTDLV
IAGEDAGSKLKKAKELGIKIIDEAEWLTLVRDT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaatatcaaaacatcgatttaatatctaaagaagaagcaaagaaattatta
atagagctagccgataaaatagcagaatataaccatgcatattatattgaggacaagcca
ttagtttcagatgctgagtatgatcagctatttaacatcaatctaaaattagaacaaaaa
tttcctcatcttaccttagaaaacagccctagcaaaaaagtaggtgctaaagtcgaaaat
aagtttgctaaagtcacgcatcaagtaccgatgctatcgcttagtaatgtatttgatgaa
gaagatgtaaaagattttttagatcgtattaaaagctttttacgccttgatcaattctct
cctatcttttgcgagcctaaaatagatggtttatcatttgctgctacctacaaaaacggc
attcttacaacaggtgcaacaagaggcgatggctatataggtgaggatataacggcaaat
atcaaaacaataaaagattttcctcacaaaattaataatgctccagagcttttagaagta
cggggggaaatttatattgaaaaaaatgactttacaagtttaaaccaagagcaagaacag
caaggcaaagataaatttgctaatcctcgtaatgcggctgccggctcgcttcgtcagctt
gatccttccgttactgcaaaaagaccactgaaatattttgtttatgctataggttctgca
aaagaggagctagcaaactctcaagatcaactacttgcaaaatttaaagagcttggtttt
aacgttaatgaaataggtaaacttgcaaactccgaagaagagatatttagcttttacgaa
tatttaaaaactaacaggggaaatttaccttatgaaattgatggggtagtatataagcta
aatgacttcgccttacaagataggatgggctttattgctaggtcaccaaggttcgctact
gcccacaaattccccgctataatagggcaaaccaaactgctttctattacagtacaagta
ggtagaaccggtacattaacaccagtagcagagcttgagcctatagaaattggcggggtc
atagttagcagagcaacattacataactatcaagagatagcacgaaaagacgtacgggtt
ggcgattatgtatttttgcaacgtgcaggtgatgtaatcccacaaattactggagttgat
cttgctaaacgttctgctgatgtcacaacatttgatcctcctttattctgtccttcttgt
aattctaaattacattatgttcctgaagatattataataagatgtgataacggtcttaac
tgccccgctcagaattatgagcgtatacgtcatttcgtatcaaaaaacgctatggatatt
gaaggacttgggcgtaagcaagttgagtttttaatcgataaaggcttaattagtaaccct
tatgatatattctttttaaaagaaaaaaacgaagctagcttaaccaaacttgaaaatatg
gacgggtggggtaaaaaatctgtagaaaatctttttaacaatattgaaaaatcaaaaaat
gttagcctgcctaggtttatatataccttaggtatcaggcatataggcgagcagaacgct
aagttactcgctagagaatttggtagctatgaaaattttatagctcaaatggaattacta
aaggaaaacgatcctgaaatttatcaaaaattaaacaatcttgacggtatcggcgacaaa
atgttagtagatatcattgatttttttgatgttaaggaaaatattgagcttatcaaaaat
ttaagtgaagtattaaatattgaagattataaagagactagagagcaaagtagcttaaca
ggtaaaatagtagtatttactggcagcatgccaactttgtcacgagctgaagcaaaagca
actgccgagaaacttggagcgaaagttgcagctagcgtttcttctaataccgatttagta
atagccggcgaggatgcaggtagtaagcttaaaaaagccaaagaactgggaattaaaatt
attgatgaagcagaatggcttactcttgtaagagatacttag
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