Roseovarius indicus: RIdsm_00510
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Entry
RIdsm_00510 CDS
T06222
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rid
Roseovarius indicus
Pathway
rid00270
Cysteine and methionine metabolism
rid00450
Selenocompound metabolism
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01230
Biosynthesis of amino acids
Module
rid_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RIdsm_00510 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RIdsm_00510 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rid01007
]
RIdsm_00510 (patB)
Enzymes [BR:
rid01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
RIdsm_00510 (patB)
Amino acid related enzymes [BR:
rid01007
]
Aminotransferase (transaminase)
Class II
RIdsm_00510 (patB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_3
DUF3197
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
QEW24727
UniProt:
A0A5P3A651
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All DBs
Position
complement(514431..515687)
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AA seq
418 aa
AA seq
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MNFDDPTDPHGTNESTGDGHASSSGAASETNFDEPIDRRGTNATKWDKMEAYGGVSPEDG
IAMWVADMDFRAADVLQEAVQGLLEKANYGYFASDAKAIQAAAWWMKERHGWAVDPDWMT
STLGLGHAIALLLETFTDPGDEVIIFTPVYHEFTNKTKNAGRVVHESPLVIRDGIYHMDF
DALEAGLTGKEKAVLISSPHNPAGRIWTVEELQQLAAFCEKHDLLMISDEIHHDLAFPGN
SYTPFMVAAPEAAHRTIVLTAASKTFNIAGARNAAVTIPEAEKRKKFRHALLVHQTQPNL
LGVELTAAAYTPRGAEWVDELVPYIAGNAQVFNDGVAQIPGVVPMPMQSTYLAWVDFANT
GLSMEDVLRRVHEDARLVPSVGGFGTGGETFLRFNIGTRRANVEEAVSRLQDAFSDLQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgacgatccaaccgacccgcacggcaccaacgagtccaccggcgacgggcac
gcgtcctcttccggtgccgcctccgaaacgaatttcgacgagccgatcgaccgccgcggc
accaacgccaccaagtgggacaagatggaggcctatggcggcgtttcgcccgaggatggc
atcgccatgtgggtcgccgacatggatttccgcgcggcggacgtcctgcaggaggccgtt
cagggccttctggaaaaggccaattacggctatttcgcctccgacgccaaggccattcag
gccgccgcctggtggatgaaggaacgccacggctgggcggtcgaccccgactggatgacc
agcacgctgggcctcggccacgccatcgcgctcctgctcgaaaccttcaccgacccgggc
gacgaggtgatcatcttcacccccgtctaccacgagttcacaaacaagacgaagaacgcc
ggccgggtggtgcacgagtcgccgctggtcatccgcgacggtatctaccacatggatttc
gacgcgctggaagccggcctgacgggcaaggaaaaggccgtcctgatctcctcgccccac
aacccggcagggcgcatctggacggtcgaggaacttcagcagctcgccgcgttctgcgaa
aagcacgacctgctgatgatctccgacgagatccaccacgacctcgccttccccggcaac
agctacacccccttcatggtggccgcgccagaggccgcccatcgcaccatcgtgctgacc
gccgcgtccaagaccttcaacatcgccggggcgcgcaacgccgccgtgaccatccccgag
gcggaaaagcgcaagaaattccgccacgcgctgctcgtccaccagacccagcccaacctg
ctgggcgtcgaactcaccgccgccgcctacacgccgcgcggcgccgaatgggtcgacgag
ctggtcccctacatcgccggcaacgcgcaggtcttcaacgatggcgtcgcgcagatcccc
ggcgtcgtgccaatgccgatgcaatccacctatctcgcctgggtcgatttcgccaatacc
ggcctgtcgatggaagacgtcctgcgccgcgtccatgaagacgcccggcttgttccctcc
gtcggcggcttcggcaccgggggcgagaccttcctccgcttcaacatcggcacccggcgc
gccaacgtggaagaggccgtctcgcggctgcaagacgccttctccgacctgcaatga
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