Roseovarius indicus: RIdsm_04541
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Entry
RIdsm_04541 CDS
T06222
Symbol
mdh_3
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rid
Roseovarius indicus
Pathway
rid00020
Citrate cycle (TCA cycle)
rid00270
Cysteine and methionine metabolism
rid00620
Pyruvate metabolism
rid00630
Glyoxylate and dicarboxylate metabolism
rid00680
Methane metabolism
rid00710
Carbon fixation by Calvin cycle
rid00720
Other carbon fixation pathways
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
Module
rid_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rid_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIdsm_04541 (mdh_3)
00620 Pyruvate metabolism
RIdsm_04541 (mdh_3)
00630 Glyoxylate and dicarboxylate metabolism
RIdsm_04541 (mdh_3)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RIdsm_04541 (mdh_3)
00720 Other carbon fixation pathways
RIdsm_04541 (mdh_3)
00680 Methane metabolism
RIdsm_04541 (mdh_3)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RIdsm_04541 (mdh_3)
Enzymes [BR:
rid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RIdsm_04541 (mdh_3)
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Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
3HCDH_N
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
QEW28702
UniProt:
A0A0T5P2E4
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All DBs
Position
4692084..4693046
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AA seq
320 aa
AA seq
DB search
MARPKIALIGAGQIGGTLAHLAALKELGDVVLFDIAEGTPEGKALDIAESGPAEGFDAAL
KGTQDYADIAGADVCIVTAGVPRKPGMSRDDLLGINLKVMKAVGEGIKANAPDAFVICIT
NPLDAMVWALQKFSGMPAEKVCGMAGVLDSARFRHFLSLEFGVSMKDVSAFVLGGHGDTM
VPCVRYSTVAGVPLPDLIEMGWTTQDKIDSIVQRTRDGGAEIVGLLKTGSAFYAPATSAI
EMAEAYLKDQKRVLPCAAYCDGDLGVKQMYVGVPTVIGAGGIERIMNIKLNKDEQKMFDT
SVKAVKGLVDACKEIDSSLA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccagacccaagattgccctcatcggcgccggacagatcggcggcacgctcgcccat
cttgcagccctcaaggaactgggcgacgtcgtcctcttcgacatcgccgaaggcaccccc
gagggcaaagcgctcgacatcgccgaatccggccctgccgaaggcttcgacgcggcgctc
aagggcacgcaggactacgccgacatcgccggcgccgacgtctgcatcgtcaccgccggt
gtcccgcgcaagccgggcatgagccgcgacgacctcctcggcatcaacctcaaggtcatg
aaggccgtcggcgaaggcatcaaggccaacgcccccgacgccttcgtcatctgcatcacc
aacccgctcgacgcgatggtctgggccctgcagaaattctccggcatgcccgccgagaag
gtctgcggcatggccggcgtgctcgacagcgcccgcttccgccacttcctcagcctcgaa
ttcggcgtctcgatgaaagacgtctcggccttcgtcctcggcggccacggcgacaccatg
gtgccctgcgtccgctactccaccgtcgccggcgtcccgctccccgacctgatcgaaatg
ggctggaccacgcaggacaagatcgacagcatcgtccagcgcacccgtgacggcggcgcc
gagatcgtgggcctcctgaaaaccggctccgccttctacgcgccggccacctcggcgatc
gaaatggccgaggcctacctgaaagaccagaagcgcgtcctgccctgcgccgcctattgc
gacggcgacctcggcgtgaagcagatgtacgtgggcgtgcccaccgtcatcggcgccggc
ggcatcgagcggatcatgaacatcaagctcaacaaggacgagcagaagatgttcgacacc
tccgtgaaggccgtgaagggcctcgtcgacgcctgcaaggaaatcgacagctcgctggcc
tga
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