Rhizophagus irregularis: OCT59_017467
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Entry
OCT59_017467 CDS
T10295
Name
(RefSeq) Isoleucine--tRNA ligase cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rie Rhizophagus irregularis
Pathway
rie00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCT59_017467
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rie01007
]
OCT59_017467
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rie03016
]
OCT59_017467
Enzymes [BR:
rie01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
OCT59_017467
Amino acid related enzymes [BR:
rie01007
]
Aminoacyl-tRNA synthetase
Class I (U)
OCT59_017467
Transfer RNA biogenesis [BR:
rie03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OCT59_017467
Prokaryotic type
Other AARSs
OCT59_017467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
36867416
NCBI-ProteinID:
XP_025178874
LinkDB
All DBs
Position
26:complement(1349667..>1354515)
Genome browser
AA seq
1072 aa
AA seq
DB search
MSQTDGQFNFPKEEEKILEFWREIDAFRTQIRLSEGKPSFSFYDGPPFATGLPHYGHLLA
GTIKDIVTRYASLTGHYVERRFGWDCHGLPVEHEIDKTFNIKGKDDVLAMGIDKYNYECR
SIVMRYADAWRETVERIGRWIDFDNDYKTLNTSFMESVWWVFSQLYKKDQVYRGVRIMPF
STACTTPIANFEAAQNYKDVNDPAIVVSFPLVNEPETLLLAWTTTPWTLPSNLALCTHPE
YEYIKIKDELSGRTYVLLEKCLNVLYKDPKKAKYTIEQRFFGKDMKGWEYIPIFDYFVSQ
FKGRGFIVLNDTYVTDDSGTGIVHQAPAFGEEDYRICLENKIITEDGFLPCPVDEQGRFT
QEVADFAGIYVKEADKNIQKILKQKNRLIIQSQLKHSYPFCWRSDTPLIYKAVPSWFVRV
KPIIDKLLKNNKESYWVPEAIKEKRFVNWITNARDWNVSRNRYWGTPIPLWVSDDYEEIV
CIGSLAELEELSGCDKLTDIHREKVDQITIPSKKGKGQLKRVEEVFDCWFESGSMPYAQC
HYPFENKERFESSFPADFIAEGLDQTRGWFYTLMVLSTHLFDKPAFKNLIVNGLVLASDG
KKMSKSLKNYPDPMFIINAYGADALRLYLINSPVVRAEPLRFKEDGVKEVISKIFLPWYN
AYRFFISQVALLQKESGIEFLYNPLAKKSTNVMDKWILACSQSLIKFVREEMKAYRLYTV
VPRLLGLIEQLTNWYVRFNRKRLKGENGPEDTIDALNTLYEVLFTLCRSMSAFTPFLTEY
MYQRLQKYFPSSGTNEEVRSVHFLSFPEIREEYFDLEIERIVSRMQAVIEMGRYIREKNN
IGLKTPLKELIVIHSDSQYHSDILSLKNYIIEELNVKNLVVTSEEDKFGIKYRAEADWKV
LGQKLKKDAVKIKEALPKLTSEQVKEFVKNGEITINGIKIFEEDLQVVRYFEDANSHYET
NNNKDVLILLDIQVYQDLQEEGYAREIVNRVQRLRKKAGLQPIDPILMYYKLTKDTENRI
EKVLQSQSDFIVKVLKRPLLPISEKSESSEIIIEEEQEVNESTFILFFIKDW
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagacagacggccagtttaattttccaaaagaagaagaaaaaatcctagaattt
tggcgtgaaattgatgctttcagaacacaaattcgattatccgaaggaaagccttccttt
tctttctatgatggacctcctttcgcaactggattgccccactatgggcatttgttagca
ggcacaataaaggacattgtgaccagatacgcttcattaacaggacattatgttgagcgc
cgatttggttgggattgccatgggcttccagtcgaacatgaaatagataaaacttttaac
attaaggggaaagatgatgttttggcgatgggtatagataaatataattacgagtgcaga
agcattgtcatgcggtatgctgatgcttggcgagaaacagtagaacgcattggtcgatgg
attgattttgataatgattataagactcttaatacatcttttatggaaagtgtttggtgg
gttttcagccaactttataagaaagatcaagtatatcgtggagttagaattatgcctttt
tctactgcttgtacaactccgattgcaaattttgaggctgctcaaaattacaaggatgtt
aatgatcctgcaattgtcgtttcttttccattggttaatgagcctgagactttattactt
gcctggacaacaactccgtggaccttacctagcaatttagcactttgtacacatcctgaa
tatgagtatattaaaatcaaggatgagctgtccggacgaacatatgtacttttagaaaaa
tgtttgaatgtgttatataaggatccgaaaaaagcaaaatatactatagaacaaaggttc
tttggtaaagacatgaaaggatgggaatatattccaatatttgactattttgtttcccag
tttaaaggtagagggtttattgttttaaatgatacatatgttacggatgatagtggaaca
ggaattgtgcaccaagctccagcatttggcgaagaggattaccgtatatgcctcgaaaat
aaaattattactgaagatgggttccttccgtgcccagttgatgaacaaggtcgtttcact
caagaagtggccgattttgccggaatctacgttaaagaagcagataaaaacatccaaaaa
attttgaaacaaaaaaaccggttaattattcaatctcaattgaaacatagttatcctttt
tgctggcgttcagatacgccgttgatatacaaagctgttccttcgtggtttgttagagtc
aaaccaatcatagacaaattactaaaaaataataaagaaagttattgggtccctgaagct
attaaagaaaagcgatttgttaactggatcacaaatgcacgtgactggaacgtttctaga
aatcgttattggggtactccgattcctctttgggttagcgatgactatgaagagattgtt
tgtattggttcgttagcagaattagaagaattgtccggatgtgataaattaactgatatt
catcgtgaaaaggttgatcaaataactattccttcgaaaaaaggaaaaggtcaactgaaa
agagtagaagaagtttttgactgttggtttgaatctggcagcatgccgtatgcacaatgt
cattacccttttgaaaataaagaaagattcgaatcctcttttcccgctgactttattgca
gaaggtttagatcaaacacgaggatggttttatactcttatggtattatcaacgcatttg
tttgataaacctgcatttaaaaatttgatcgttaatggtttggtcttagcatctgatggg
aagaaaatgagcaaaagtctcaaaaactatcctgatcccatgtttatcattaatgcttat
ggtgctgatgcattaaggttatatcttattaactctccagtagtccgtgctgaaccattg
agatttaaagaagatggagttaaagaagtaatttcaaaaatatttttgccttggtataat
gcctatagatttttcatatcacaggtggcccttcttcaaaaggaatcaggcatagaattt
ctttacaatccattagcaaagaaatcaacaaatgttatggataaatggattttagcatgt
tcgcaaagtctgataaaatttgtgagagaagaaatgaaagcatatcgtttatacacggtt
gtgcctcggctacttggtttgattgaacagctgacaaactggtatgttagatttaaccgc
aagcgcctgaaaggagaaaatggccctgaagatactatagatgctctcaacacactttat
gaagtattatttacgttatgtcgttctatgtctgcatttactcctttccttaccgaatat
atgtaccaaagattacagaaatattttccatcatccggtactaatgaggaagttcgttca
gtgcatttcttatcatttccagaaattcgagaagaatattttgacttagagattgaaaga
attgtttcacgtatgcaagcagttattgaaatgggtcgctatatccgcgagaaaaataat
attggtcttaagacaccattaaaagaactgattgtcatccattcagactctcaatatcat
tctgatatcctctcattgaaaaattatattattgaggaactgaatgttaaaaatcttgtc
gtcacatctgaagaagataaatttggtattaaatatcgagcagaagcagactggaaagta
ttaggtcagaaactgaagaaagatgctgtaaagattaaagaagctttgcctaaattgact
tctgaacaagtcaaagagtttgttaaaaatggagagattacaattaatgggatcaaaatt
tttgaagaggacttacaagtagtcagatactttgaggatgctaatagtcattatgaaaca
aataacaataaagatgttttgatccttttggatatccaagtttatcaagatttgcaggaa
gaaggatatgcacgagaaattgtaaatcgtgtgcaaagactcaggaaaaaggcagggttg
caacctatcgatccaattttaatgtattataaacttacaaaggatactgaaaatcggatt
gaaaaagttctacaatctcaatcagattttattgttaaagttttgaaacgtcctctttta
cctatttctgaaaagtctgaaagtagtgaaattattatagaagaagaacaagaggttaat
gaatcaacttttattttattttttattaaagattggtaa
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