Rhizophagus irregularis: OCT59_017955
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Entry
OCT59_017955 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
rie Rhizophagus irregularis
Brite
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
OCT59_017955
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36863894
NCBI-ProteinID:
XP_025186912
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Position
27:complement(215643..217976)
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AA seq
768 aa
AA seq
DB search
MGVPGFFKWLSLRYPHIIETVKKPPRSKTDFLYLDINALFHVATRNKASSKKKHRTPRRV
LSKVFKEMDAAFNICEPQVLVYIAMDGVAPRAKMNEQRSRRYLAQDNHKSILPSSPSNTS
ISGNISSSESSDDASKNEKDGKDSGFFVPVDSVSISAGTSFMQAANDAIRYYIYQRLNGR
ARNLQIIFNDSSVAGEGEHKIFRFLNTQRKHPGYNSKFKHTVCGGDADFIMYALLTHEPN
LRILRPGVDGKDVVLNISKLRKHIVHDMVVPQLNKVINEENIIEDFVCIVNLLGNDFLPR
VTYLRETGVDLLFKAYRNYFNESRTYIINKGGFINMDRFLRFIKFLEDVIFGRRMSNLSF
TSIGNINEAAIRANDYVKTICWILQYYSGECPSWRFYYPHHKPPSIHDILNHVKAENFDQ
TFTKDTPMRPFEQLMSIIPPVCHYLLPEPFRDLLTDPKSPIVKYYPREYSCSNSKAVLPF
IDEKVLSETMAPRYSLLSPEDERRNNVNGNIQIYAGRNSSSYSIIYSLCTARGGKFVFPA
DSKFYGQLFYDGQMRISIDSPINEWSKIYRNSVVNAEYKLPCVPDNLSKLQLLLNITATL
SSSNKNEALFNYQPSSSSCSNKNEQKSKIIPNSNLIKDNRNMYEGYSEYQSNASTGYLTN
QSNVETSVQLRPTSVNLTNLTSQSRNYGTTTNLRHNKSKIDQLFSDSYTNGQYRRSVAPQ
AKVQNNVRYSANRNQTISTYNNQNIRQEGQFNSFNTVNNGNINYSRKY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaccgggtttctttaagtggttatctttgcgttatcctcatattatagaaaca
gtcaaaaaaccacctcgcagcaaaacagattttttatatttagatatcaatgctttattt
catgttgcaactcgtaataaagccagctctaaaaaaaaacatcggaccccacgtagagta
ttatcaaaagtatttaaagaaatggacgctgcgttcaacatttgtgaaccacaagtatta
gtatatatagcaatggatggtgttgctcctagagcgaaaatgaatgaacaaaggtcaaga
agatatttggctcaagataatcataaatcaattctaccttctagtccaagcaatacttct
atttcaggcaatatttcatcaagtgaatcttcagatgatgcttcaaaaaatgaaaaagat
ggaaaagattcaggattttttgttccagttgattccgtttctatatcagcgggaacatct
tttatgcaagcggcgaatgatgcaattagatattacatttatcaacgtttaaatggtaga
gcaagaaaccttcaaataatattcaacgattcgagtgtagcaggtgaaggtgaacacaaa
atatttcgatttttaaatacacaacgtaaacatccaggctataattcgaaattcaaacat
acggtttgtgggggagatgctgacttcatcatgtacgctttgttaacacatgaacctaac
ctgcgcattttacgacccggagttgacggcaaagatgttgtgcttaacataagtaaactt
cgtaaacatattgtacatgatatggtagtacctcaattaaataaagtgattaacgaggag
aatataatcgaagattttgtatgtatcgtaaacttacttgggaatgattttttaccaaga
gtaacttatctacgtgaaacaggagtggatctcttattcaaagcatacagaaattatttc
aatgaatctcgtacttatattatcaacaaaggaggttttattaacatggaccgatttctc
aggtttatcaagtttttagaagatgtgatatttggtcgtcgcatgtcaaatttgagtttt
acttcaataggaaacattaacgaagctgcgatcagagctaatgattatgtaaagacgatt
tgttggattttacaatattattctggtgaatgcccaagttggagattctattatcctcat
cataaaccgccatctattcatgatatattgaatcatgtaaaagcagaaaatttcgaccaa
acttttactaaggacactccaatgcgaccatttgagcaattaatgagtattatacctcca
gtatgtcattatcttttgcccgagcctttccgtgatttacttacagacccaaagtcacca
attgtaaaatattatccaagagaatatagttgttcaaactctaaagctgtcttgccgttt
atcgatgagaaggttttatcagaaacaatggcaccacgatattctttactaagtcctgaa
gacgaacgtagaaataatgtcaatggaaacatacaaatttatgcaggtcgaaactcatca
tcctattcaataatctattctctttgtacggcgagaggtggaaaattcgtttttcctgcg
gactcgaaattctatgggcaattattttatgatggacaaatgcggatatcaattgactcg
cctattaacgaatggagcaaaatttatcgtaattcagtagttaatgctgagtacaagttg
ccatgtgtccctgacaacttgtcgaaattacagcttcttcttaatattactgcaacgcta
tcttcatccaataaaaatgaggcgctttttaattatcaaccttcttcatcatcgtgttct
aataagaatgagcaaaaatctaaaattattccaaactcaaacttgataaaggacaatagg
aatatgtatgagggatactcagaataccaatcaaatgcaagtactgggtatttaacaaat
caatcgaatgtggaaacttcagtacagctgagacctacttctgtcaatttgacaaatttg
acatctcaatctcgaaattatggaacaacaacaaatttacgtcataacaaatcaaagata
gaccaattattttcagacagttatactaatggtcaatacagaagaagcgtggcacctcaa
gcaaaagttcaaaataatgttagatattctgctaatcgaaatcaaacgatttcgacatat
aataatcaaaatatcagacaagaaggacaatttaattctttcaatactgtaaataatggt
aatataaattattcccggaaatattaa
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