KEGG   Rhizophagus irregularis: OCT59_025057
Entry
OCT59_025057      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
rie  Rhizophagus irregularis
Pathway
rie03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OCT59_025057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rie03041]
    OCT59_025057
Spliceosome [BR:rie03041]
 Complex A
  U2 snRNP components
   U2 related factors
    OCT59_025057
 Complex B
    OCT59_025057
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    OCT59_025057
SSDB
Motif
Pfam: SMN_Tudor TUDOR LBR_tudor PWWP DUF4537 Tudor_2 PUA_4
Other DBs
NCBI-GeneID: 36868934
NCBI-ProteinID: XP_065991835
LinkDB
Position
5:2428054..2429656
AA seq 234 aa
MNAEELAQYQYQLDQVNLALKSEPENSELLKLKTDLTELINLTNTIIDQEVTLSPSKRSA
SSISPRTNSTPTTPTSFSIPTFTKPLQVGDSCLARWSGDGQFYQAQITAIGGGDQVFSVV
FKGYNNVELVDVQDIKPLEKNKKKGLNDKKDKDKKKKSGEGQKKINEQNLKQKSWLAFAS
GSAMAPGRKTTKTKRLVQPPINKKSIFATPENPEGKGKLNRSFMNYTNFLVTNE
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaacgctgaagaacttgcacaataccaatatcagcttgaccaagttaatcttgcttta
aaaagtgaacctgaaaattccgaacttttgaaacttaaaacggatctgacagaattaatt
aatcttacgaataccattattgatcaagaggtaacactttcaccttctaaaaggtcagct
tcttcgatttcacctagaacaaattcaacgccgactacaccgacttcattttcgatacca
acttttacaaaaccacttcaagttggagattcttgtctagcgcggtggtctggtgatgga
cagttttaccaagctcaaataacagctattggtggtggtgatcaagttttttcagttgtt
tttaaaggttataataatgttgaacttgttgacgttcaagatattaaacctctagaaaaa
aataaaaagaaaggtttgaatgataaaaaggataaagataaaaaaaagaagagcggtgaa
ggacaaaagaaaattaatgaacaaaacttgaaacaaaagtcttggcttgcctttgcgagc
ggttcagctatggctcctggtaggaaaacaacgaaaacaaaaaggctggtacagccgccg
ataaacaagaagagtatctttgctactccagaaaatccggaaggcaaaggtaagttaaat
cgaagttttatgaattacaccaattttctggttactaatgaataa

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