Rhizobium indigoferae: U5G49_002943
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Entry
U5G49_002943 CDS
T09660
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00540
Lipopolysaccharide biosynthesis
rif01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
U5G49_002943 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rif01005
]
U5G49_002943 (lpxC)
Enzymes [BR:
rif01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
U5G49_002943 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rif01005
]
Lipid A
U5G49_002943 (lpxC)
SSDB
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Paralog
GFIT
Motif
Pfam:
LpxC
RebB
Motif
Other DBs
NCBI-ProteinID:
WQN37799
UniProt:
A0ABZ0ZEC5
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All DBs
Position
complement(2910325..2911281)
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AA seq
318 aa
AA seq
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MAIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVIFQRLHDNGDITELKAVS
SQVGNTDLCTVLGFSPAHSVATIEHVMAAVYALGLDNVVIEVQGSEMPIMDGSSLPFVEA
IEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRFEVEIDFDCPLIGRQKWAGD
MTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLSLAGVQFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRV
AARELIAVSASEFAPWSA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaattggcttgctgggttttcaaacgacggtatcgcgtccggtgacgctttcgggc
atcggggtgcattcgggcgctaacgtctcgatcaccctgaatccggccgaatcggacacc
ggcgtcattttccagcgtctgcatgacaatggcgacatcaccgaactgaaggccgtctcc
tcgcaggtcggcaatactgacctctgcaccgttctcggcttctctcccgcccattcggtc
gcgacgatcgagcatgtcatggccgccgtctacgcgctcggcctcgacaatgtggtgatc
gaagtgcagggctccgaaatgccgatcatggatggcagctcgctgcccttcgtcgaggcg
atcgagcaggtcggtctcgtctcgctcggcgtcaagcgccgctatatccgtatcaccaag
ccggtgcggatcgagcatggcggctcctggagcgaattccgcccctatgacggtacgcgc
ttcgaagtcgagatcgatttcgactgcccgctgatcggccggcagaagtgggccggtgac
atgaccgccgccgtcttcaaggccgagctttcccgcgcccgcaccttcgggttcatgcgc
gatgtcgagcgcctctgggcgtcgggccatgcgctcggctcctcgcttgaaaattccgtc
gtcatctcggacgacaacaccgtcatcaacgtcgaagggctgcgttacgccaaggatgaa
ttcgtccgccacaagacgctcgatgccgtcggcgatctgtcgcttgccggtgtccagttc
atcggttgctaccgttcctatcgcggcggtcacaagatgaatgccaatgcgctgaaggcg
ctgctcgccgatccctccgcctacgaggttgtggagacgtcgacgccgcgccagcgtgtc
gctgcccgcgaactgattgcagtcagcgcttcggaattcgctccctggtcggcatga
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