Rhizobium indigoferae: U5G49_002958
Help
Entry
U5G49_002958 CDS
T09660
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00300
Lysine biosynthesis
rif00550
Peptidoglycan biosynthesis
rif01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U5G49_002958
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U5G49_002958
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
U5G49_002958
Enzymes [BR:
rif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
U5G49_002958
Peptidoglycan biosynthesis and degradation proteins [BR:
rif01011
]
Precursor biosynthesis
Amino acid ligase
U5G49_002958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
WQN37814
LinkDB
All DBs
Position
complement(2928675..2930195)
Genome browser
AA seq
506 aa
AA seq
DB search
MNIDADSRGVNRLQEGKVRSMKLRDLAGDQFPELEAQLEGPAGLLDISGLSSDSRKVAPG
NAFVAVAGTKADGAGFIADAAGRGAAVAIASQAVDASIPVLAVKEPRRFLSIAAARFHGK
QPDTMVAVTGTAGKTSVASFTRQIWAHAGHAAAMIGTTGVVSPTRNEYGSLTTPDPVSLH
ALLAELAGEGVTHAAMEASSHGLDQCRLDGVKLAAAAFTNLGRDHMDYHPTIEAYMAAKM
RLFDTLLPKGSPAVIFADDPWSSQAIKSATDAGHDIRTVGRKGDYLSLKRVEHFRHKQMA
EIHIGGEIFEVDIPLAGDFQVANALVAAGLAMSTGVEAKVAMAALEKLVGASGRLELVGH
TKDGALAYVDYAHKPDALENVLGSVRPFTTGRVIVVFGCGGDRDRGKRPIMGEIACRLAD
VVIVTDDNPRSEEPASIRAEIMAAAGCAAEIADRATAIREAVGMLRSGDTLIVAGKGHEE
GQTIGGVTLPFSDHAEVRKALEELKS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgacgccgattcgcgaggggtgaaccggcttcaagagggaaaagtgcgttcg
atgaaattgcgagacctggccggagatcagtttccggaacttgaagcacagctcgaaggc
ccggcaggcttgcttgatatctcaggcctgtcttcggatagccgcaaggtggcgcctggc
aatgccttcgtcgcagtcgccggcaccaaggcggacggcgcaggcttcatcgcggatgcc
gccggccgtggcgctgccgtcgcgatcgcctcccaagccgtcgatgcttcgatccccgtg
cttgcggtcaaggagccgcgccgcttcctttccatcgccgccgcgcgtttccacggcaag
cagcccgataccatggtcgccgtcaccggcacggcgggcaaaacctccgtcgcttctttc
acccggcagatctgggcgcatgcgggccacgcggctgcgatgatcggcacgacgggcgtc
gtttcgccgacgcgcaacgaatatggctcgctgacgacgcccgatccggtgtctctgcac
gcgctgctggcggaactcgccggagaaggcgtgacgcatgccgcgatggaagcgtccagc
cacggcctcgaccagtgccggctcgacggcgtgaagcttgctgccgccgccttcaccaat
ctcggccgagaccacatggattatcatcccacgatcgaggcctatatggccgccaagatg
cggcttttcgatacgctgttgccgaaggggtcgccggcagtgatcttcgccgacgatccg
tggtcgtcgcaggcgatcaagtccgcgaccgatgccggtcacgacattcgtaccgtcggg
cgaaagggcgattacctctcgttaaagcgcgtcgagcacttccgccacaagcagatggcc
gaaatccatatcggcggcgagatcttcgaggtggacattccgctggccggcgattttcag
gtggccaatgcgctggtcgcagcggggcttgccatgtcgaccggcgttgaggcgaaggtt
gcgatggccgcgctcgagaaactcgtcggcgcgtccggccgtctcgaactcgtcggccat
acaaaagacggcgcgctcgcctatgtcgactacgcccacaagccggatgcgctggaaaac
gtgctgggctcggtcagacccttcaccaccggccgcgtcattgtcgttttcggctgcggc
ggcgaccgtgaccgcggcaaacggccgatcatgggcgaaatcgcctgccgacttgccgac
gtcgttatagtcaccgacgataatccgcgttctgaggagccggcctcgatccgggcggag
atcatggcagcagcaggctgcgccgcggaaatcgccgatcgcgccacggcgatccgcgag
gctgttggcatgctgagatccggcgatacgctgatcgtcgccggcaaggggcatgaggaa
gggcagacgatcggcggcgtcaccctgccgttctccgatcatgcggaggtgcgcaaggcc
ttggaggagttgaaatcttga
DBGET
integrated database retrieval system
