Rhizobium indigoferae: U5G49_003012
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Entry
U5G49_003012 CDS
T09660
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00270
Cysteine and methionine metabolism
rif00450
Selenocompound metabolism
rif00670
One carbon pool by folate
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif01230
Biosynthesis of amino acids
rif04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
U5G49_003012 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
U5G49_003012 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U5G49_003012 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
U5G49_003012 (metH)
Enzymes [BR:
rif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
U5G49_003012 (metH)
BRITE hierarchy
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WQN37867
LinkDB
All DBs
Position
complement(2987260..2991033)
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AA seq
1257 aa
AA seq
DB search
MFDNLFGPETGKRDGSEVFAALKQAASERILVLDGAMGTQIQGLGYDEDQFRGTRFIGCA
CHQKGNNDLLILTQPDAIEEIHYRYAKAGADILETNTFSSTRIAQADYEMEGAVYDLNKE
GAEIVRRAALRAEREDGRRRFVAGAIGPTNRTASISPDVNNPGFRAVTFDDLRSAYGEQI
DGLIDGGADIILIETIFDTLNAKAAIFACEERFEAKGVRLPVMISGTITDLSGRTLSGQT
PSAFWNSVRHANPFTIGLNCALGANAMRPHLQELSGVADTFICAYPNAGLPNEFGQYDET
PELMAAQIDSFAREGLVNIVGGCCGSTPEHIKAIAETVAKYKPRPIPEHRPFMSLSGLEP
FELTKDIPFVNVGERTNVTGSARFRKLITNADFTAALDVARDQVENGAQVIDINMDEGLI
DSEKAMVEFLNLIAAEPDIARVPVMIDSSKFSIIESGLKRVQGKPIVNSISLKEGEENFL
AQARLLHNYGAAVVVMAFDETGQADSYERKVDICTRAYKLLTEKIGYPPEDIIFDPNIFA
VATGIEEHNNYGVDFIEATRTIRERMPLVHISGGVSNLSFSFRGNEPVREAMHAVFLYHA
IQAGMDMGIVNAGQLAVYDNIDPELRQACEDVVLNRRADGTERLLEVAERFRGAGAREGR
VQDLSWREWSVEKRLEHALVNGITEYIEADTEEARQQAARPLHVIEGPLMAGMNVVGDLF
GSGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRLNGGDERRSAGKILMATVKGDVHDIGK
NIVGVVLACNNYEIVDLGVMVPATKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMER
QGFEIPLLIGGATTSRVHTAVKIHPGYNKGQTVYVTDASRAVGVVSALLSPETRQSYVDD
IRAEYAKVAAAHARSEAEKVRLPLPRARENAHKIDWSAYQPVKPQFFGTRVFEDYDLAEL
AKYIDWTPFFQTWELRGRYPAILEDEKQGEAARALWADAQAMLKKIIDEKWFRPRAVIGF
WPAGAVGDDIRLFTDESRKQELETFYTLRQQLSKRDGRPNVALSDFVAPVTSGVQDYVGG
FVVTAGIEEIAIAERFERANDDYSSILVKALADRFAEAFAERMHEQVRREYWGYAKDETL
SKEDLITEAYAGIRPAPGYPAQPDHTEKATLFKLLDAEKAAGVKLTESYAMWPGSSVSGL
YIGHPDSYYFGVAKVERDQVEDYAARKGMEVSEVERWLGPVLNYVPRKVETEIEDAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacaatctctttggtccggaaacgggcaagcgtgacggcagtgaagttttcgca
gctttgaaacaagccgcgagcgaacgcatccttgttctcgacggcgccatgggcacgcag
atccaggggctcggctatgacgaagaccagtttcgcggaacgcgcttcatcggctgcgcc
tgtcaccagaagggcaataacgaccttctgatcctgacccagccggatgcgatcgaagag
atacattacagatacgccaaggccggcgccgacattctcgagaccaacaccttctcttcg
acccgcatcgcgcaggccgattacgagatggaaggtgcggtttacgacctcaacaaggaa
ggtgcggagatcgtgcgccgggcggcactgcgcgccgagcgcgaggacggccgccgccgc
ttcgtcgccggcgccatcgggccgaccaaccgcaccgcctcgatctcgcccgacgtcaac
aatccgggcttccgcgccgtcaccttcgacgatctgcgttccgcttatggcgagcagatc
gacgggctgatcgacggcggcgccgacatcatcctcatcgagacgatcttcgacacgctg
aatgccaaggcggcgatcttcgcctgcgaggagcgcttcgaggccaagggcgtgcgcctg
cccgtgatgatctcgggcacgatcaccgacctttccggccgcacgctgtccggccagacg
ccatcggccttctggaattccgtgcgccatgccaatcccttcacgatcgggctcaactgc
gcgctcggcgccaatgcgatgcgcccgcacctgcaggagctttcgggcgttgccgacacc
ttcatctgcgcctatccgaatgccggcctgccgaacgagttcggccagtatgacgaaacg
ccggagctgatggcggcgcagatcgacagcttcgcccgcgaaggcctggtcaacatcgtc
ggtggctgctgcggctcgacgccggagcatatcaaggcgatcgccgagaccgttgccaag
tacaagccacggccgattcccgagcaccgccccttcatgtcgctgtcgggtctcgaaccc
ttcgaactgacgaaggacatccccttcgtcaatgtcggcgagcgcaccaacgtcaccggc
tcggcccgcttccgcaagctgatcaccaacgccgatttcaccgcagcgctcgatgtcgcc
cgcgaccaggttgagaacggcgcgcaggtgatcgacatcaacatggacgaaggcctgatc
gattccgaaaaggcgatggtcgagttcctcaacctgatcgccgccgagcctgacatcgcc
cgcgtgcctgtcatgatcgactcgtcgaagttctcgatcatcgaatccggcctgaagcgc
gttcagggcaagccgatcgtcaactcgatctcgctgaaggaaggcgaggagaacttcctc
gcccaggcgcggctgctgcacaattacggtgccgccgtcgtcgtcatggccttcgatgag
acggggcaggcggacagctacgagcgcaaggtggatatctgcacgcgcgcctacaagctg
ctgaccgaaaagatcggctacccgcctgaggacatcattttcgatccgaacatcttcgcg
gtcgccaccggcatcgaagagcacaacaactacggcgtcgatttcatcgaggcgacgcgg
acgatccgcgagcgcatgccgctggtgcatatttcgggcggcgtctccaacctgtccttc
tcgttccgcggcaacgagccggtgcgcgaggcgatgcatgccgtgttcctctaccacgcc
atccaggcggggatggacatgggcatcgtcaatgccggccagcttgccgtctacgacaat
atcgatcccgagctgcgccaggcttgcgaggacgtggtgctgaaccgccgcgccgacggc
accgagcggctgctcgaagtggccgagcgtttccgtggcgccggtgccagggaaggccgg
gtccaggatctctcctggcgcgaatggagcgtcgagaagcgtctcgaacacgcgctggtc
aacggcatcaccgaatatatcgaggccgataccgaggaggcgcgccagcaggccgcccgg
ccgctgcacgtcatcgaagggccgctgatggccggcatgaatgtcgtcggcgacctgttc
ggctcgggcaagatgttcctgccgcaggtggtcaagtcggcgcgcgtgatgaagcaggcg
gtcgccgtgctgctgccctacatggaagaggaaaagcgcctcaacggcggcgatgaacgc
cggtcggccggcaagatcctgatggcgacggtcaagggcgacgtacacgatatcggcaag
aacatcgtcggcgtcgtgcttgcctgcaacaattacgagatcgtcgacctcggcgtcatg
gtgccggcgacgaagatccttgaaacggcgattgccgagaaggtcgacgtcatcggcctt
tccggcctgatcacgccgtcgctcgacgagatggtgcatgttgccgccgagatggagcgg
cagggtttcgagatcccgctgttgatcggcggggcgacgaccagtcgcgtgcatacggcc
gtgaagatccatccgggctacaacaaggggcagacggtctacgtcaccgatgcgagccgc
gccgtcggcgttgtttcggcgctgctgtcgccggagacccgccagagctatgtcgacgat
ataagagccgaatatgccaaggtggcggccgcccatgcgcgcagcgaggccgagaaggtg
cgcctgccgctgccccgggctcgcgagaatgcccacaagatcgactggtctgcctaccag
ccggtgaagccgcaattcttcggcacgcgggtgttcgaggattacgatctggccgagctt
gccaaatacatcgactggacgccgttcttccagacctgggagctgcgcggccgttacccc
gccattctggaagacgagaagcagggcgaggcggcgcgcgcgctctgggccgatgcgcag
gccatgctcaaaaagatcatcgacgagaagtggttccgcccgcgcgccgtcatcggcttc
tggccggccggcgccgtcggcgacgatatccggctgttcacggacgagagccggaaacag
gagcttgagaccttctatacgctgcggcagcagctttcgaagcgggacgggcggccgaac
gtggcgctctccgacttcgtcgcgcctgtcacaagcggtgttcaggattatgtcggcggc
ttcgtggtgacggcgggtatcgaggagatcgccatcgccgaacgtttcgaacgggcgaac
gacgattattcttcgatcctcgtcaaggcgctggccgaccgcttcgccgaagcttttgcc
gagcgcatgcatgaacaggtacgacgcgaatactggggctatgccaaggacgagacgctc
agcaaggaggatctcatcaccgaagcctatgccggcatccgcccggcgcccggttatccc
gcccagcctgaccacaccgaaaaggcaacgctgttcaaactgctcgacgctgaaaaagcg
gctggcgtgaagctgacggagagctatgcgatgtggccgggttcctcggtctccggcctc
tatatcggccatcccgactcctattatttcggcgttgccaaggtggagcgcgatcaggtg
gaagactatgcggcccgcaagggcatggaggtttccgaagtcgagcgctggctcggaccg
gtgctgaactacgtgccgcgcaaggtcgaaaccgagatcgaggatgcggcgtaa
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