Rhizobium indigoferae: U5G49_003395
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Entry
U5G49_003395 CDS
T09660
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rif
Rhizobium indigoferae
Pathway
rif01501
beta-Lactam resistance
rif01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U5G49_003395
01503 Cationic antimicrobial peptide (CAMP) resistance
U5G49_003395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rif03036
]
U5G49_003395
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_003395
01504 Antimicrobial resistance genes [BR:
rif01504
]
U5G49_003395
Chromosome and associated proteins [BR:
rif03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
U5G49_003395
Transporters [BR:
rif02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
U5G49_003395
Antimicrobial resistance genes [BR:
rif01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U5G49_003395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
CzcB_C
HH_MFP_RND
HH_YBHG
BSH_RND
BSH_YknX
BSH_CusB
BSH_CzcB
Tropomyosin
VIT_2
DUF7491
Motif
Other DBs
NCBI-ProteinID:
WQN38241
UniProt:
A0ABZ0ZF35
LinkDB
All DBs
Position
3389495..3390685
Genome browser
AA seq
396 aa
AA seq
DB search
MARKPIGILGAFTLFAAVLAASTALSQEAPVAKPQQNLPAIVVTTAVNRTLVDRVIGTGT
VKPVEEVYIQPQVEGLSIRTLKADVGDKVQAESTLATLNDDALVLEKSQMMATKAKGEAS
LAQLRAQLIEAQANAEQARQQQARAQEMGKKGTVSTAQVEQADATAAAANARVVSAEQAI
EVSEADLKVFDSQIADADLKLARTDVKTPVAGTVSAKNAKVGAIAAGNGDPLFTIIRDGD
IELVAEVAESDVVRIMAGQKATISLSGSRDKLSGAVRLVSPTVDPVTRLGLVHISIDDDS
KARSGMYGSAEIIVRETQGVALPLTAVLTGNEGSSARKVEDGVVKFAKIETGIQDGAYVE
VINGLKTGDEVVAKAGAYVRDGDHITPVREQLPASN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagccgattggaattctaggcgcctttactctttttgcagcggtacttgct
gcatctaccgcattatcgcaggaagcgccggtcgcaaaaccgcagcagaacctgccggcg
atcgtcgtcaccacggcggtgaaccgcaccctcgtcgaccgtgtcatcggcacaggaacg
gtcaagcccgtcgaggaagtctatatccagccgcaggtcgaaggcctctcgattcgcacg
ctgaaagccgatgtcggcgacaaggttcaggcggaaagcacgctggcgacgctcaacgat
gacgcactggtcttggaaaagagccagatgatggcgacgaaggccaagggcgaggcaagc
ctcgcccagctgcgcgcccagctcatcgaggcgcaggccaatgccgaacaggcaaggcag
cagcaggcccgcgcccaggaaatgggcaagaagggcaccgtttccaccgcccaggtcgaa
caggccgatgcgactgccgccgcagccaatgcccgcgtcgtctccgccgaacaggcgatc
gaggtctccgaagcggatctcaaggtcttcgacagccagatcgccgatgcagatttgaag
ttggcgcgcaccgatgtgaagacgccggtcgccggcacggtctcggcaaagaacgccaag
gtcggcgccattgccgctggcaatggcgatccgctgttcaccatcatccgcgatggcgat
atcgagcttgtcgctgaggtcgccgaaagcgatgttgtcaggatcatggccggccaaaag
gcaacaatttcgctttccggcagccgcgacaagctttcgggcgccgtccgcctggtttcg
ccgactgtcgatccggttacccgccttggcctcgtccatatctccatcgatgatgacagc
aaggcgcgttccggcatgtatggcagcgccgagatcatcgtgcgcgagacgcaaggcgta
gcgcttcccctgaccgcggtactcaccggcaacgaaggttcctccgcccgcaaagtcgag
gacggcgtggtgaaattcgccaagatcgagaccggcatccaggacggcgcctatgtcgag
gtcatcaatggattgaagaccggcgacgaggtcgtggccaaggcgggcgcttacgtccgc
gacggcgaccacatcacgccggtgcgtgaacagctcccggcttccaactaa
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