Rhizobium indigoferae: U5G49_003829
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Entry
U5G49_003829 CDS
T09660
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rif
Rhizobium indigoferae
Pathway
rif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U5G49_003829 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rif03400
]
U5G49_003829 (nth)
Enzymes [BR:
rif01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
U5G49_003829 (nth)
DNA repair and recombination proteins [BR:
rif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U5G49_003829 (nth)
Prokaryotic type
U5G49_003829 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WQN38659
LinkDB
All DBs
Position
3862908..3863714
Genome browser
AA seq
268 aa
AA seq
DB search
MAAEYRVSMANPKLKSVTKTPQDTKVIVSRKSAAAVRTAYSLAEREEIFRRFSVQRPEPR
GELEHTNPFTLVVAVALSAQATDVGVNKATRALFKVADTPEKMLDLGEERLRDYIRTIGL
YRNKAKNVIALSQMLVDQFGGKVPETRDELVRLPGVGRKTANVVLSMAFGQATMAVDTHI
FRIANRIRLAPGKTPDEVEARLMKVIPKHYLYHAHHWLILHGRYTCKARRPECERCVIAD
LCKSPEKSWDVPAPLVELPPQMIGEAVE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagtatagagtttccatggcaaatccgaaactcaaatccgttaccaagacg
cctcaggatacgaaagtgatcgtcagccgcaaatcggcggcagcggtgcgcaccgcctat
tcactggccgagcgagaggaaatcttccgtcgcttctcggtgcagcggccggaaccgagg
ggcgagctcgagcacaccaaccccttcacgctcgtcgtcgccgtcgcgctttcggcgcaa
gcgaccgatgtcggcgtcaataaggcgacgcgcgcgctcttcaaggttgccgatacgccg
gaaaagatgctcgatctcggcgaggagcggctgcgcgattacatcaggacgatcggcctc
taccgcaacaaggcgaaaaacgttatcgcactctcacagatgctggtcgaccaattcggc
ggcaaggtgccggagacgcgcgacgaactggtgagattgccgggcgtcggccgcaagacc
gccaatgtcgtgctttccatggccttcggccaggcgacgatggccgtcgatacgcacatc
ttccgcatcgccaatcgcatcaggcttgcccccggtaagacgccagacgaggtcgaggcg
cggctgatgaaggtgatcccgaagcattacctctatcacgcccatcactggctgatcctg
catggtcgctacacctgcaaggcgcgccggcccgaatgcgagcgttgcgtcattgccgat
ctctgcaaatcgccggagaagagttgggatgtgccggcgccgctcgtcgagctaccacca
cagatgatcggcgaggccgtcgagtag
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