Rhizobium indicum: FFM53_016135
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Entry
FFM53_016135 CDS
T07009
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rii
Rhizobium indicum
Pathway
rii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFM53_016135 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rii03400
]
FFM53_016135 (nth)
Enzymes [BR:
rii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FFM53_016135 (nth)
DNA repair and recombination proteins [BR:
rii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFM53_016135 (nth)
Prokaryotic type
FFM53_016135 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKK17872
UniProt:
A0ABX6PFK2
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All DBs
Position
complement(3303397..3304203)
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AA seq
268 aa
AA seq
DB search
MAADYRVSMANPKLKSVTKMPQDANVIARRKPAAVVRTVYSLAEREEIFRRFSVQRPEPR
GELEHINPFTLVVAVALSAQATDVGVNKATRALFRIADTPEKMLDLGEERLRDHIRTIGL
YRNKAKNVIALSQMLVDQFGGKVPETRDELVRLPGVGRKTANVVLSMAFGQATMAVDTHI
FRIANRIRLAPGKTPDEVEARLMKVIPSHYLYHAHHWLILHGRYTCKARRPECERCIIAD
LCKSPEKSWDVPAPLVELPPQMIGEAVE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgattatagagtttccatggcaaatccgaaactcaaatccgtgaccaagatg
cctcaggacgcgaatgtgatcgcccgccgcaaaccggcggctgtggtgcgcacggtctat
tcactggccgagcgcgaggagatcttccgccgcttctcggtgcagcggccggaaccgagg
ggcgagctcgagcatatcaaccccttcacactcgtcgtcgccgtggcactttcggcgcag
gcgaccgatgtcggcgtcaacaaggcgacgcgcgcgctcttcaggatcgccgatacgccg
gaaaagatgctcgatctcggcgaggagcggctgcgcgatcacatcaggacgatcggcctc
tatcgcaacaaggcgaaaaacgtcatcgcgctctcgcagatgctggtcgaccaattcggc
ggcaaggtgccggaaacgcgcgacgagttggtgagattgccgggcgtcggccgcaagacc
gccaatgtcgtgctttccatggccttcggccaggcgacgatggctgtcgacacgcacatc
ttccggatcgccaatcgcatcaggcttgcccccggcaagacgcccgacgaggtcgaggcg
cggctgatgaaggtgatcccgagccattacctctatcacgcccatcactggctgatcctg
cacggtcgctatacctgcaaggcacgccggcccgaatgcgagcgctgtatcatcgccgat
ctctgcaaatcgccggagaagagttgggatgtgccggcgccgctggtcgagctaccgccg
cagatgatcggcgaggccgtcgagtag
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