Rhizobium indicum: FFM53_021055
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Entry
FFM53_021055 CDS
T07009
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rii
Rhizobium indicum
Pathway
rii01501
beta-Lactam resistance
rii01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFM53_021055
01503 Cationic antimicrobial peptide (CAMP) resistance
FFM53_021055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rii03036
]
FFM53_021055
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_021055
01504 Antimicrobial resistance genes [BR:
rii01504
]
FFM53_021055
Chromosome and associated proteins [BR:
rii03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FFM53_021055
Transporters [BR:
rii02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFM53_021055
Antimicrobial resistance genes [BR:
rii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FFM53_021055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
NQRA_N
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QKK18796
LinkDB
All DBs
Position
4343159..4344367
Genome browser
AA seq
402 aa
AA seq
DB search
MAFWKQFVLSLIVIIAGFAAWVFFVPGAGDTMRDAGIPDSIVSKIAPKAGETADADAPAR
AQGQRGEGQGQGQNRRNGGGRNNTILVATQAVVQGIVNDRLNAIGTGDAIRSVAVTPQAS
GTIREILIKSGDRVTAGQVLAKLDSEEQVIARGQADVAVKAAVEKSNLYHNIKSSVSRMD
VFDSEIAEQGARLQLQAAELNLARRNITAPIDGIVGIVPVNIGDNVTTSIPIVTLDDRSE
ILVDYWVPERFANTVSVGQPVEAMSVARPGQVFSGLVEAVDNRIDAASRTLRLRARIDNS
SDELRAGMSFSVSMKFPGDKYPAVDPVSVQWDSQGSFVWQVNDDKSHKVRVSIVQRNPDF
VLVKADLEDGDVIVTQGLQRVREGGAVRVSADVAATAEVATQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccttttggaagcagtttgtactttcgctcatcgtcattattgccggctttgccgcg
tgggttttcttcgtgcccggcgccggcgatacgatgcgcgatgcaggcattccagacagc
atcgtttccaagatcgcgccgaaggccggggagacggccgatgccgacgctcccgcccgg
gcgcaagggcagcgtggcgagggacaagggcagggacagaaccgccgcaatggcggcggg
cgcaacaacaccattctcgtcgcgacgcaggccgtcgtccaagggatcgtcaacgaccgg
ctgaacgccatcggcacgggtgacgcgatccgttcggttgcggtcacgccgcaggcatcc
ggcacgatccgcgaaattctcatcaagtcgggcgatagggtgacggccggccaggtgctg
gccaagctcgacagcgaggagcaggtgatcgcccgcggccaggctgatgtggcggtcaag
gccgccgtcgagaagtcgaatctctatcacaacatcaagtccagcgtgtcgcgcatggac
gtgttcgattcggagatcgccgagcagggcgcgcggctgcagctgcaggccgccgagctc
aatctcgcccggcgcaacatcaccgcgccgatcgacggcatcgtcggcatcgtgccggtc
aatatcggcgacaacgtcacgacgagcatcccgatcgtcactcttgacgaccgttcggaa
atccttgtcgactactgggtgccggagcgcttcgccaatacggtgtcggtcggccagccg
gtcgaggcgatgtctgtggcaaggccggggcaggtgttttcgggcttggtcgaagccgtc
gacaaccgcatcgacgcggcaagccgcacgctgcgcctacgcgcccggatcgacaacagt
tcggacgagctgcgtgccggcatgtccttcagtgtcagcatgaaatttcctggcgacaaa
tatccggctgtcgacccggtctccgtgcagtgggattcgcagggctccttcgtctggcag
gtcaacgacgacaagtcgcataaggtgcgggtcagcatcgtgcagcgcaacccggatttc
gtgctcgtcaaagccgatctcgaggatggcgacgtgatcgtcacacagggactgcaacgc
gtgcgtgagggtggggcggtgcgcgtgagcgccgatgtcgccgcgactgcggaggtcgcc
acccaatga
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