Rhizobium indicum: FFM53_021060
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Entry
FFM53_021060 CDS
T07009
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rii
Rhizobium indicum
Pathway
rii01501
beta-Lactam resistance
rii01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rii00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFM53_021060
01503 Cationic antimicrobial peptide (CAMP) resistance
FFM53_021060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rii02000
]
FFM53_021060
01504 Antimicrobial resistance genes [BR:
rii01504
]
FFM53_021060
Transporters [BR:
rii02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FFM53_021060
Antimicrobial resistance genes [BR:
rii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FFM53_021060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF4690
Motif
Other DBs
NCBI-ProteinID:
QKK18797
LinkDB
All DBs
Position
4344364..4347519
Genome browser
AA seq
1051 aa
AA seq
DB search
MNVTEIHQDRASGKQSFTALFVRRPILALVFNTLMVVAGLAAYVGVEVRELPDVDRPVVT
VRTTFDGASPQTIDQELTKVIEGAVARVSGLKSISSTSSFGQSRVTLEFSDAIDLSVAAN
DVRDAIGRITQNLPDEADAPQIVKADSDSSAIMRLAVTSTNLNMDDLTQLVENEVIDRLA
SVDGVADVEEYGDQEKVFRVDVDQGALASRGLTIGDLTKALDNAALDVPAGSLKSNTQDI
VVRATANLQTPADFSNVILQDRVRLGDVATVMLGPRDGETALRSNGKPGIGLGIIRQAQS
NTLNISTGIKAAVDQLSKTLPEGTTIAITSDDAVFIQGAIHEVVLALVLAAVIVTAVIYL
FLRDWRATLIPAVSMPVALIGTLAAIYMVGFSINILTLLAIVLATGLVVDDAIVVLENIV
RRRSEGMGPRAAAVLGTREVFFAVVATTATLAAVFIPLSFLPGQVGGLFREFGFVLAFSV
GLSSIVALTLCPMLASRMLTKPMLEDHGMLGRFGGALADLYKWALHGCLNAPFVVILFSV
IFAGAALIAFSTVKSELTPEEDRSLVMMRLTTPQGSSLEYTRDKMQLVEEYLQPLVDSGD
IRNIFSISGQGGSLNSGFMVLTLAPWGERDRTQTEIVGDINQAASRVPALRGNAISSNSL
RIRGAGSGLQMALIGNDHEALTAAAAKLVQSLEATGQYDTPRLTNEPSQAQVSVAIDRER
ASDLGIDITGLSTAIQSLLEGRSVVDVFVDGESYPVLLTSTTRPIDDPTDLENVFLKTGD
GKIVPMSVIATMKEGSVAPQLNREQQLASVAITAGLRNGMSLGDAVSQVTALAEPLLPPG
SRLLPLAEAATLEENSSGMALTFGFAIVIIFLVLAAQFESVLSSLIIMSTVPLGLACAVF
ALVITGSSLNIYSQIGLVLLVGVMAKNGILIVEFANQLRDRGEDVRSSIEKACALRLRPV
MMTMIATILGGVPLVFAHGAGAEARVALGWVIVGGLGFATLVTLFITPVAYLLLARFAKP
HAHEEARLHEEMSVATRPRAAPDDEQLQAAE
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgaccgaaattcatcaggaccgggcgtcgggcaagcagagcttcactgcactt
ttcgttcgtcgaccgatcctggcgctggtgttcaacacgctgatggtcgttgccggcctt
gccgcctatgtcggcgtcgaggtgcgcgaactgcccgatgtcgaccgtcccgtcgtcacc
gtgcgcaccaccttcgacggcgcatcgccgcagacgatcgaccaggaactgaccaaggtg
atcgagggggcggtcgcgcgcgtcagcggcctgaaatcgatttcgtcgacctcgtccttc
ggtcagagccgggtgacgctggaattctcggatgcgatcgatctctcggtcgccgccaac
gacgtgcgcgacgcgatcggccgcattacccagaacctgcccgacgaagcggatgcgccg
cagatcgtcaaggcggattcggattcctcggcgatcatgcgccttgccgtcacctccacc
aatctcaacatggacgatctgacccagctcgtcgaaaacgaggtgatcgatcgcctcgcc
tccgtcgacggggttgccgacgtcgaggaatatggcgaccaggagaaggtcttccgcgtc
gatgtcgaccagggggctcttgccagccgcgggctgaccatcggcgacctgacgaaggca
ctcgacaatgccgcactcgacgtgccggccggctcgctgaagagcaatacgcaggatatc
gtggtgcgcgccaccgccaacctgcagaccccggcggatttttccaacgtcatcctgcag
gaccgcgtccggctcggtgacgtcgcgacggtgatgcttggaccacgcgacggcgaaacg
gcgctgcgctccaacggcaagccgggcatcggcctcggcatcatccgccaggcgcaatcg
aatacgctgaacatctcgaccggcatcaaggccgccgtcgaccagctgtcgaagacgctg
cccgagggcacgacgatcgccatcaccagcgacgacgccgtcttcatccagggtgcgatc
cacgaggtggtgctggcgctggtgctcgccgccgtcatcgtcaccgccgtcatctacctc
ttcctgcgcgactggcgggcgacactgatcccggcggtcagcatgccggtggcgctgatc
ggcacgctggcggcgatctacatggtcggcttctcgatcaacatcctgacgctgctcgca
atcgtactggcgaccggcctcgtcgtcgacgatgcgatcgtggtgctcgaaaatatcgta
cgccggcgctccgaaggcatggggccgcgcgctgccgccgtgctcggaacgcgcgaggtg
ttcttcgccgtcgtcgccacgacggcgacgctggcggcggtgttcattccgctctcattc
ttgccgggacaggtcggtggcctcttccgcgaattcggcttcgtgctcgccttctcggtc
gggctgtcgtcgatcgtggcgctgacgctgtgtccgatgctcgcctcgcgcatgctgacc
aagccgatgctggaagatcacggcatgctcggccgcttcggcggggcgctcgccgatctc
tacaaatgggcgctgcacggctgtctcaacgcgcccttcgtcgtcatcctgttctcggtg
atctttgccggtgcggcactcatcgctttctcgacggtgaagagcgagctgacgcccgaa
gaggaccggtcgctggtgatgatgcggctgacgacgccgcagggatcgagcctcgaatat
acccgcgacaagatgcaactcgtcgaagaatatctgcagccgttggtcgacagcggcgac
atccgcaatatcttttcgatctccgggcagggcggttcgctgaacagcggcttcatggtg
ctgacgctcgctccctggggagagcgtgacaggacgcagacggagatcgtcggcgatatc
aaccaggcagcctccagggtgccggccctgcgcggcaatgctatttcctcgaacagcctt
cgcatccgcggcgccggcagtggtctgcagatggcgctgatcggcaatgatcacgaggcg
ctgacggcggcagccgccaagctggttcagtcgctcgaggccaccggccagtatgatacg
ccgcgcctgaccaacgagcccagccaggcgcaggtatcggtcgcgatcgatcgcgagcgc
gcctcggatctcggcatcgacataaccgggctttcgacggcaatccaatcgctgctcgaa
gggcgatcggtggtcgacgtcttcgtcgacggcgaatcctatcctgtgcttctgacctcg
acgacgcggccgatcgacgatccgaccgaccttgagaacgtgttcctgaagaccggcgac
ggcaagatcgtaccgatgtcggtcatcgccacgatgaaggaaggttcggtcgcgccgcag
ctcaaccgcgagcagcagctcgcctccgtggcgatcaccgccggcctcaggaacggcatg
tcgctcggcgatgccgtcagccaagtgactgcgctcgccgagccgctgctgccgccaggc
tcccgcctgttgccgctcgccgaggcggcgacgctcgaagagaattcgagcggcatggcg
ctgaccttcggcttcgccatcgtcatcatcttcctggtgctggccgcgcagttcgaaagc
gtgctgtcctcgctgatcatcatgtcgacggtgccgcttggtcttgcctgcgccgtcttc
gcacttgttatcaccggctccagcctcaacatctacagtcagatcggcctggtgctgctc
gtcggcgtcatggcgaagaacggtatcctgatcgtcgaattcgccaatcagctgcgcgac
cggggcgaggatgtgcggtcctctatcgagaaggcctgcgcgctgcgccttcgccccgtg
atgatgacgatgatcgccaccatcctcggcggcgtgccgctggtctttgctcatggcgcc
ggtgccgaagcacgcgttgcgctcggctgggtgattgtcggcggcctcggtttcgcgacg
ctggtgacgctgttcatcacgccggtcgcctatctgctgcttgcccgcttcgccaagccg
cacgcccacgaggaagcgcgcctgcacgaagaaatgtcggtcgccacacggccgcgcgcc
gcacccgacgacgagcagctgcaggccgccgaataa
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