Romboutsia ilealis: CRIB_120 Help Entry CRIB_120          CDS       T09982                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ril  Romboutsia ilealis Pathway ril03030   DNA replication ril03410   Base excision repair ril03420   Nucleotide excision repair ril03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ril00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CRIB_120    03410 Base excision repair     CRIB_120    03420 Nucleotide excision repair     CRIB_120    03430 Mismatch repair     CRIB_120  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ril03032]     CRIB_120    03400 DNA repair and recombination proteins [BR:ril03400]     CRIB_120 Enzymes [BR:ril01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CRIB_120 DNA replication proteins [BR:ril03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CRIB_120 DNA repair and recombination proteins [BR:ril03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CRIB_120    NER (nucleotide excision repair)     GGR (global genome repair) factors      CRIB_120    MMR (mismatch excision repair)     DNA ligase      CRIB_120   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CRIB_120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 BRCT_2 Nlig-Ia RNA_ligase 5_3_exonuc RUBY_RBDX RNA_pol_A_CTD DUF4796_N Motif Other DBs NCBI-ProteinID:  CED92879 UniProt:  A0A1V1HYA1 LinkDB All DBs Position 1:133029..135050 Genome browser AA seq 673 aa AA seqDB search MNVEKIINELIDKINYHNEKYYNEDSPEISDIEYDNLVKELIKLEEENPQFKRIDSPTNR VGGKALEKFNQITHKIPMLSLSNAYSYSDLKDFDKRVRDMVNEDIEYVVEFKIDGLSVGI TYDNGEFQYGATRGNGVIGEDISKNLMTIKNIPLKINDNDEIVVRGEVYISKEDFKKVNE QQSEQDLQGFANPRNLAAGSLRQLDPKLTAKRPLDIFIFNLEYSQNNQFKSHSESLEFLS KLGFSVSPNYKVCKNIDEVIEHIKYWTENRENLEFEIDGMVIKVNSLKQRESMGYTAKSP RWAIAYKFPAEKKKTKIIDIIVEVGRTGTITPTAVLEPVRLAGTSVSRATLHNEDYIKEK DIKINDTVLVQKAGDIIPQVLEVIKEERTGEEVEFNMPDKCPVCSEPTVRLEGESAVKCI NISCPAQIRRGIIHFASRDAMNIDGLGESIISLLLNENIINDISDLYKIRKEDVVNLERM GEKSATNLINAINKSKENDLWRLINGLGIKFIGTKGAKILANSYKDLDKIMNTTASELVN LEEFGETMANSVVEFFKEDKNIKVVDKLKEYGLNTKVIENENNDINKVFEGMKIVLTGTL PTLKRNDAKEMIESRGGKSTSSVSKSTTFVLAGEEAGSKLTKANELGIKVIDEDTFIELC KLSSKEDVESRLK NT seq 2022 nt NT seq  +upstreamnt  +downstreamnt atgaatgtagaaaaaataatcaatgaattaatagataaaataaattatcataatgaaaaa tattacaatgaagatagtccagagatatcagatatagaatatgataatttagtaaaagag ttgattaaattagaggaagaaaatccacaatttaagaggattgattctccaactaataga gttggtggaaaggcactagaaaaatttaaccaaataacacataaaataccaatgttgagt ttatctaatgcatattcatattcagacttaaaagactttgataaaagagtaagagatatg gtaaatgaagatattgaatatgtagttgaatttaagatagatggtttatcagtgggtatt acatatgataatggagagtttcaatatggagcaactaggggaaatggagttataggagag gatatatctaaaaatctaatgactattaaaaacatacctctaaaaataaatgataatgat gagatagttgtaaggggagaagtatacatatctaaagaagattttaaaaaggtaaatgag caacaatcagaacaagatcttcaaggatttgcaaatccacgaaatttagcagcaggatct cttagacagctagatccaaaattaacagctaaaagaccattagacatatttatatttaac ttagagtactcacaaaacaatcaatttaaaagtcatagtgagtctttagaatttttaagt aaattaggattttctgtgagtccaaattataaagtatgtaaaaatatagatgaagtaatt gaacacattaaatattggacagaaaatagagaaaacttagaatttgaaatagatggaatg gtaataaaagtaaatagtttaaagcaaagagaatctatgggatacacagcaaaaagtcca agatgggctattgcatacaaattcccggcagaaaagaaaaaaacaaaaataatagatata atagtagaagtaggaagaacaggtactataactcctacagccgttttagaacctgttaga ctagctggaacaagtgtaagcagagcgacattacacaatgaagattatataaaagaaaaa gatataaaaattaatgatacagtattagttcaaaaggcaggagatataattcctcaagta ctagaagtaataaaagaagagcgtacaggtgaagaagtagaatttaatatgccagataaa tgcccagtttgctcagagccaacagtaagattagaaggagaatctgctgtaaaatgtata aatatatcttgtccagctcaaataagaagaggaataatacactttgcatctagagatgct atgaacatagatggactaggagaatctataataagtttattattaaatgaaaatataata aatgatatatcagatctatataaaattagaaaagaagatgtggtaaacttagaaagaatg ggtgaaaaatcagctactaatcttataaatgcaatcaataaatcaaaagaaaatgattta tggagattaattaatgggttgggtattaaatttataggaacaaagggagcaaaaatactt gctaatagttataaagatttagataaaataatgaatactacagcaagtgaacttgtaaat ctagaagagtttggtgagactatggcaaatagtgtagttgaattctttaaagaagataaa aatataaaagtagtagataaattaaaagaatatggactaaatactaaagttatagaaaat gaaaataatgatataaataaagtatttgaaggaatgaaaattgttttaacaggtactctt cctactttaaaaagaaatgatgcaaaagaaatgatagagtcaagaggaggaaagtcaaca tcaagtgtaagtaagtcaacaactttcgtattagctggagaagaagcaggatcaaagctt acaaaagctaatgaattaggtataaaggtgatagatgaagatacatttatagaactttgt aaattatcatctaaagaagacgtagaaagtagattaaaatag

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