Roseburia intestinalis M50/1: ROI_28160
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Entry
ROI_28160 CDS
T02598
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetases
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00300
Lysine biosynthesis
rim00550
Peptidoglycan biosynthesis
rim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROI_28160
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROI_28160
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rim01011
]
ROI_28160
Enzymes [BR:
rim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ROI_28160
Peptidoglycan biosynthesis and degradation proteins [BR:
rim01011
]
Precursor biosynthesis
Amino acid ligase
ROI_28160
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
CBL09731
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Position
complement(2821984..2823534)
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AA seq
516 aa
AA seq
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MRLDQLLKHFSYESVQGSHDLIITDICYHSGKVKRGSLFVCIKGQYTDGHDYIMDAVKAG
AFAVVVDESCMVNVRWECFIYTEHGKVRVHELVRNYGMAVIGVKDTRQALAQISAAFYDY
PAKKLKIIGITGTKGKTTTAFLTAGILKEAGYKTGMVGTIWTYNGKDVKKAGHTTPESSD
LQRELAQMVSNGCVCCVMEVSSQGIKMQRVEGIFFDIGVFLNIEPDHIGPGEHASFAEYL
YCKSRLLRQCQAGIVNRDDRNTEKILFGHTCDIETFSVLGENGVDAPGQKADIVAERITF
SMKEGRLYSHFFTDGKEEFLLQIPGIFNVSNALAAILVARHFKIAQDVVKDALQRQTVPG
RCENVRISDKFVFLVDYAHNEMSLRNLLGTLRGFDPGRLVVIFGCGGNRSKLRRGRMGET
AGRLADFTILTSDNPRWEDPELILDDIESGIKGTSGAYIRIADRRAAVAYAFDHAREGDI
IVLAGKGHEDYQEIGGVRYPMEDKELVKKAAEGRGR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcggttagatcaattactcaaacatttttcatacgaaagcgtgcaggggagccacgac
cttatcattacggatatctgttatcattccggaaaagtaaagcgggggtccctgtttgtc
tgtataaaggggcagtacacggatggacatgattatattatggatgcggtaaaagcgggg
gcatttgcagtggtggtggatgaaagctgtatggtaaatgtccgctgggaatgtttcatt
tacacagaacatggaaaagtgcgcgtgcatgaactcgtgcgcaattacggtatggctgtg
ataggtgtgaaggataccaggcaggctcttgcgcagatttcggctgcattttacgattac
ccggcaaaaaagcttaagatcatcgggatcaccggaacaaaaggaaagacgacgacggcg
tttcttacggcaggaattttaaaagaagcgggatacaagaccggcatggtaggtacgata
tggacatataacgggaaagatgtaaaaaaggccggacatacgacaccggaatctagcgac
ctgcaaagagaattagcgcagatggtaagcaacggatgtgtgtgctgtgtgatggaggta
tcctcacagggaatcaagatgcagcgtgtggaagggattttttttgatatcggggtgttt
ttaaacattgaaccggatcatatcggaccgggagaacacgcatcatttgcagagtatctg
tactgtaaaagccggctgcttcggcagtgtcaggcaggaattgtcaaccgtgatgaccgg
aatacggaaaaaatactgtttggtcatacctgtgacatagaaactttttccgtgctggga
gaaaacggtgtggatgccccgggacaaaaggcggatattgtggcagaaaggatcactttt
tccatgaaagaaggaaggttatacagccacttttttacggatggaaaagaagaattccta
ttgcagatacccggaatttttaatgtttccaatgcgttagctgcgatccttgtggcacgt
cattttaaaatagcacaggatgtggtaaaggatgcactgcaaagacagactgtgccgggg
cggtgtgaaaacgtcaggatatcagataaatttgtatttctggtcgattatgcacacaat
gagatgagcctgcgcaatctgcttggaacattgcggggctttgatccggggcggcttgtt
gtgatctttggctgtgggggcaaccgctcaaaattaaggagaggcaggatgggtgagaca
gcgggaagactcgcggattttacgatcctgacatccgataatccaaggtgggaagatccg
gaactgatcttagatgacattgagagcgggataaagggtacgagcggggcatacatacgc
attgctgaccggagagcagcggtggcatatgcattcgatcatgcaagggagggcgatatt
atcgtcctcgcaggaaaagggcatgaggactatcaggagatcggtggtgtccgttatccg
atggaggacaaagaactggtaaagaaagcagcagaaggacgtggcagatag
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