Ralstonia insidiosa: ACS15_1957
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Entry
ACS15_1957 CDS
T04471
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
rin
Ralstonia insidiosa
Pathway
rin03030
DNA replication
rin03410
Base excision repair
rin03420
Nucleotide excision repair
rin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACS15_1957 (ligA)
03410 Base excision repair
ACS15_1957 (ligA)
03420 Nucleotide excision repair
ACS15_1957 (ligA)
03430 Mismatch repair
ACS15_1957 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rin03032
]
ACS15_1957 (ligA)
03400 DNA repair and recombination proteins [BR:
rin03400
]
ACS15_1957 (ligA)
Enzymes [BR:
rin01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACS15_1957 (ligA)
DNA replication proteins [BR:
rin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACS15_1957 (ligA)
DNA repair and recombination proteins [BR:
rin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACS15_1957 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACS15_1957 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACS15_1957 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACS15_1957 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
BRCT_2
HHH
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
ANH73734
UniProt:
A0AAC9FRH5
LinkDB
All DBs
Position
1:complement(1946394..1948841)
Genome browser
AA seq
815 aa
AA seq
DB search
MSKTAEPASGPSSKDRPETRAAWLRATLNRYAHEYYVLDQPSVPDAEYDRLYRELEALEA
EYPELKTPDSPTLRVGGAILPEFAQVRHVIPMLSIRTETDTTANGARAFDASVRRELGLD
ETDPPVEYAAELKFDGLAISLRYERGFLLQAATRGDGTTGEDVTQNIRTIRQIPLGLTPV
DGSVPEVLEVRGEVYMRRDDFEKLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPL
SFFAYGLGEVVGWSGLPKTHSSMLDALQAFGFPVSKERAAVKGGEGLVEFHAAIGAKRDS
LPFDIDGVVYKVNDLALQRELGFRTREPRWAVAHKYPAQEALTTVESIDVQVGRTGAITP
VARLVPVFVGGVTVTNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLDRRPMDD
VPGSDLFNSQQQPKYPPFELPKTCPVCGSHVVREVGEAVARCSGGLFCSAQRKEAIRHFA
GRRMMDIEGLGERYIDNLVELDYVHGIADLYKLKLEDLLEMKRRADERDGRGGDTAPETV
AAGKIATKWAENLLEGIQASKTPPLARFLFALGIRHVGESTAKTLADWLGSLAMIRRAPA
PLLLALPDVGATVAEAIADFFAEPKNQQALDALLEAGVTPQGEHAPNAKLREKLEPAELY
ATLGVPKLTATRAKQLAVVAPTLAQLAAVEAGQLAGLPADVSASLLEWLGAHDHRAQLVQ
LDALRNELLAVMPAEAAEEGILAGKTVVLTGTLPNLTRDDAKAMLEAAGAKVSGSVSKKT
DYVIAGEEAGSKLAKAEELGVKVLDEAGMLALLQK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccgcagaacccgcgtccggaccgtcctcgaaagaccggcccgagacgcgg
gcagcgtggctgcgcgccacgctcaaccgctatgcccacgagtactacgtgctcgaccag
cccagtgtgccggacgccgaatacgaccggttgtaccgtgagttggaagcgctggaagct
gaatatccggaactgaaaacacccgactcccctacgctccgtgtgggcggggcgatcctg
ccggagtttgcgcaggtccggcatgtcattccgatgctgtcgatccgcacggagaccgac
accaccgccaacggtgcccgtgcgttcgatgccagcgtgcgccgtgagcttggcctcgat
gagaccgatccgcctgtcgaatacgcggctgagctgaagttcgacggcctggcgatcagc
ctgcgctacgagcgcggcttcctcttgcaagcagccacacgcggtgatggcaccacgggc
gaagacgtcacgcagaacatccggacgatccgccagattccgctggggcttacgcctgtg
gacgggtctgtgcccgaggtgttggaagtacgcggcgaggtctatatgcgccgcgacgat
ttcgagaagctcaatgcccgtcagcgtgagcgcggcgacaaaaccttcgtcaacccgcgc
aacaccgctgccggtgcggtgcgtcagcttgacccgaagatggccgccgagcgcccgctg
tcgttcttcgcctatggcctgggcgaagtggtcggctggagtggcctacccaagacgcac
tccagcatgctcgatgcgctgcaggcgttcggcttcccggtcagcaaggagcgtgcggca
gtgaagggcggcgaaggcctggtcgaattccacgccgccattggtgccaagcgcgacagc
ctgccgttcgatatcgatggcgtggtctacaaggtcaatgacctggcattgcaacgcgaa
ctgggctttcgcacgcgcgagccgcgctgggcggtggcgcacaagtatccggcgcaggaa
gcattgaccaccgtcgaatcgatcgacgtgcaggttggccgcacgggcgccatcacgccg
gtggcgcgtctggtgcccgtgtttgttggtggcgtgacagtcaccaacgcgacgctgcac
aacgaagacgaagtccgccgcaaggacgtgcgtgtaggcgacaccgtgatcgtgcgtcgt
gcgggagacgtgatccccgaggtggtgagcgtggtgctcgaccgtcgtccaatggatgac
gtgccgggcagcgacctgttcaactcacagcagcagcccaagtacccgccattcgagttg
ccgaagacctgtccggtatgcggttcgcatgtggtgcgcgaagtgggcgaagcggtggcg
cgttgctcgggcggcctgttctgctcggcgcagcgcaaggaagcgatccgtcactttgcc
ggccgccgcatgatggacattgagggcctgggcgagcgctatatcgacaacctggtcgaa
ctggactacgtgcacggtattgccgacctgtacaagctcaagctcgaagaccttctcgag
atgaagcgtcgcgccgacgagcgcgacggccgggggggcgacactgcccccgagaccgtt
gccgccggcaagatcgccaccaagtgggcggagaacctgcttgagggtatccaggccagc
aagacgccgccgttggcgcgcttcctgtttgcgctgggtattcgccacgtaggcgaatcg
accgccaagacactcgccgattggctgggcagtctggccatgatccggcgtgcgccggcg
ccgttgttgttggcgttgccggacgtgggcgcaacggtggcggaggccatcgccgatttc
tttgccgagccgaagaatcagcaggcgttggatgcgctgctcgaagccggcgtcaccccc
cagggtgagcatgcgcccaacgccaaactacgcgagaaactggagccggccgagttgtac
gccacgctcggtgtgcccaagttgacggctacgcgcgccaagcaattggcggtggtggcc
cccacgcttgcgcaactggcggctgtggaagccgggcagttggccggcctaccggcggac
gtgtccgcatcgctgctcgaatggctgggcgcgcatgatcatcgtgcgcaactcgtgcag
cttgatgcactgcgcaacgaactgctcgcagtcatgccggccgaggcggcggaagagggc
atccttgctggcaagaccgtcgtgctgaccggcacgctgcccaacctcacgcgcgatgac
gccaaggcgatgctggaagccgccggcgccaaggtgtcgggctcggtatcgaagaagacc
gactacgtcatcgccggtgaagaggctggcagcaagctcgccaaggcagaagagctgggg
gtgaaggttctggacgaagcgggtatgctcgcgctgttgcaaaaatag
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