KEGG   Candidatus Riesia pediculicola: RIEPE_0288
Entry
RIEPE_0288        CDS       T01218                                 
Name
(GenBank) endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rip  Candidatus Riesia pediculicola
Pathway
rip03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RIEPE_0288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rip03400]
    RIEPE_0288
Enzymes [BR:rip01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RIEPE_0288
DNA repair and recombination proteins [BR:rip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RIEPE_0288
 Prokaryotic type
     RIEPE_0288
SSDB
Motif
Pfam: HhH-GPD HHH DUF4317 RecR_HhH
Other DBs
NCBI-ProteinID: ADD79503
UniProt: D4G883
LinkDB
Position
281902..282549
AA seq 215 aa
MNHKIRMEILNRFRRRDTYSSNTDLCVNSNFELLISTVLSTRSRNSLVNLVTEDLYRTAN
NANKMIFLGSKKIKKIIEKIGLSRVKSKNILNICQILIQKYKGNVPNTRKSLECLPGVGR
KVSNVVLNIGFGYSTIAVDTHVFRVCNRTGFAISNSYLKLEKYLLSIVPIRFRRRFHYLF
FLHGKVICTYKNPSCLCCFISDLCEYKNKNMTINS
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaatcataagataagaatggaaattttaaatcgttttagaagaagggatacgtattct
tcaaatactgatctttgtgtaaattctaattttgaattgttaatttctacagtcttatct
actagatcaagaaacagtttggttaatttagtaaccgaagacttgtatagaactgctaat
aatgcaaataaaatgatttttttaggatctaaaaaaattaaaaaaatcatagaaaaaata
ggattatctagagtaaaatcgaaaaatatattgaatatctgtcaaattttaattcaaaaa
tacaaaggaaacgttccaaacaccagaaaatctttagaatgtcttccgggagttggaaga
aaagtttctaacgtagtattaaacattggtttcggttattcaacaattgcagttgatact
catgtttttagagtatgtaatagaactggttttgcaatttctaatagctaccttaagtta
gaaaagtatttgctgagtattgttcctataagatttagaagaagatttcattacttattt
tttttacatgggaaagttatttgtacttataaaaatccttcttgcttgtgttgttttatt
tcagacttgtgtgaatataaaaataaaaatatgacaataaatagttag

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